Post-normalization of total copy numbers

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Documentation for package ‘NSA’ version 0.0.32

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NSA-package Package NSA
fitNSA Find normal regions
fitNSA.matrix Find normal regions
NSA Package NSA
NSAByTotalAndFracB Finds normal regions within tumoral samples (total,fracB)
NSAByTotalAndFracB.matrix Finds normal regions within tumoral samples (total,fracB)
NSANormalization The NSANormalization class
sampleNByTotalAndFracB Normalize total copy numbers by samples (total,fracB)
sampleNByTotalAndFracB.numeric Normalize total copy numbers by samples (total,fracB)
SampleNormalization The SampleNormalization class
snpsNByTotalAndFracB Normalize allele-specific copy numbers (total,fracB)
snpsNByTotalAndFracB.matrix Normalize allele-specific copy numbers (total,fracB)
SNPsNormalization The SNPsNormalization class