Multiscale Codependence Analysis

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Documentation for package ‘codep’ version 0.6-5

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codep-package Functions and methods to perform Multiscale Codependence Analysis (MCA)
codep Functions and methods to perform Multiscale Codependence Analysis (MCA)
cthreshold Familywise type I error rate
Doubs The Doubs fish data
Doubs.env The Doubs fish data
Doubs.fish The Doubs fish data
Doubs.geo The Doubs fish data
dphi Frequency distributions for MCA parametric testing
dtau Frequency distributions for MCA parametric testing
eigenmap Spatial eigenvector maps
eigenmap-class Class and methods for spatial eigenvector maps
eigenmap.score Spatial eigenvector maps
fitted.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
gcd.hf Great circle distances
gcd.slc Great circle distances
gcd.vife Great circle distances
MCA Multiple-descriptors, Multiscale Codependence Analysis
mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
mca-class Class and methods for Multiscale Codependence Analysis involving multiple descriptors
minpermute Number of permutations for MCA
Mite Lac Geai oribatid mites community data
mite.env Lac Geai oribatid mites community data
mite.geo Lac Geai oribatid mites community data
mite.species Lac Geai oribatid mites community data
permute.mca Multiple-descriptors, Multiscale Codependence Analysis
plot.eigenmap Class and methods for spatial eigenvector maps
plot.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
pphi Frequency distributions for MCA parametric testing
predict.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
print.eigenmap Class and methods for spatial eigenvector maps
print.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
Product-distribution Frequency distributions for MCA parametric testing
ptau Frequency distributions for MCA parametric testing
residuals.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
Salmon Juvenile Atlantic salmon (parr) density in St-Marguerite river, Québec, Canada
summary.mca Class and methods for Multiscale Codependence Analysis involving multiple descriptors
test.mca Multiple-descriptors, Multiscale Codependence Analysis
Wf.binary Spatial eigenvector maps
Wf.Drayf1 Spatial eigenvector maps
Wf.Drayf2 Spatial eigenvector maps
Wf.Drayf3 Spatial eigenvector maps
Wf.PCNM Spatial eigenvector maps
Wf.sqrd Spatial eigenvector maps