Models for Health Economic Evaluation


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Documentation for package ‘heemod’ version 0.9.0

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A B C D E G H L M N O P R S T U W

heemod-package heemod: Health Economic Evaluation MODelling

-- A --

add_hazards Add Hazards
add_hazards_ Add Hazards
apply_af Apply an Acceleration Factor
apply_hr Apply a Hazard Ratio
apply_or Apply an Odds Ratio

-- B --

beta Probability Density Functions for Probabilistic Uncertainty Analysis
binomial Probability Density Functions for Probabilistic Uncertainty Analysis

-- C --

calibrate_model Calibrate Model Parameters
close_cluster Run 'heemod' on a Cluster
cluster Run 'heemod' on a Cluster
combine_probs Combine Probabilities
compute_surv Evaluate Survival Distributions

-- D --

define_calibration_fn Define Calibration Function
define_correlation Define a Correlation Structure for Probabilistic Uncertainty Analysis
define_correlation_ Define a Correlation Structure for Probabilistic Uncertainty Analysis
define_distribution Probability Density Functions for Probabilistic Uncertainty Analysis
define_dsa Define a Sensitivity Analysis
define_dsa_ Define a Sensitivity Analysis
define_inflow Define Inflow for a BIA
define_inflow_ Define Inflow for a BIA
define_init Define Initial Counts
define_init_ Define Initial Counts
define_multinom Define That Parameters Belong to the Same Multinomial Distribution
define_parameters Define Markov Model Parameters
define_parameters_ Define Markov Model Parameters
define_part_surv Define Partitioned Survival
define_part_surv_ Define Partitioned Survival
define_psa Define Parameters Distribution for Probabilistic Analysis
define_psa_ Define Parameters Distribution for Probabilistic Analysis
define_spline_survival Define a Restricted Cubic Spline Survival Distribution
define_state Define a Markov Model State
define_state_ Define a Markov Model State
define_strategy Define a Markov Model
define_strategy_ Define a Markov Model
define_survival Define a Survival Distribution
define_transition Define Transition Matrix for Markov Model
define_transition_ Define Transition Matrix for Markov Model
dispatch_strategy Dispatch Values According to Strategy
distributions Probability Density Functions for Probabilistic Uncertainty Analysis

-- E --

export_savi Export PSA Results for SAVI

-- G --

gamma Probability Density Functions for Probabilistic Uncertainty Analysis
get_code Display the Code to Generate an Object
get_code.run_model Display the Code to Generate an Object
get_code.state Display the Code to Generate an Object
get_code.uneval_matrix Display the Code to Generate an Object
get_code.uneval_model Display the Code to Generate an Object
get_code.uneval_parameters Display the Code to Generate an Object
get_code.uneval_state_list Display the Code to Generate an Object
get_counts Get State Membership Counts
get_counts.combined_model Get State Membership Counts
get_counts.eval_strategy Get State Membership Counts
get_counts.list Get State Membership Counts
get_counts.run_model Get State Membership Counts
get_counts.updated_model Get State Membership Counts
get_values Get Strategy Values
get_values.combined_model Get Strategy Values
get_values.eval_strategy Get Strategy Values
get_values.list Get Strategy Values
get_values.run_model Get Strategy Values
get_values.updated_model Get Strategy Values
get_who_mr Use WHO Mortality Rate
get_who_mr_memo Use WHO Mortality Rate

-- H --

heemod heemod: Health Economic Evaluation MODelling

-- L --

logitnormal Probability Density Functions for Probabilistic Uncertainty Analysis
lognormal Probability Density Functions for Probabilistic Uncertainty Analysis
look_up Look Up Values in a Data Frame

-- M --

modify Modify Object
modify.state Define a Markov Model State
modify.uneval_matrix Define Transition Matrix for Markov Model
modify.uneval_parameters Define Markov Model Parameters
multinomial Probability Density Functions for Probabilistic Uncertainty Analysis

-- N --

normal Probability Density Functions for Probabilistic Uncertainty Analysis

-- O --

or_to_prob Convenience Functions to Compute Probabilities

-- P --

plot.dsa Plot Sensitivity Analysis
plot.psa Plot Results of Probabilistic Analysis
plot.run_model Plot Results of a Markov Model
plot.surv_obj Plot general survival models
plot.uneval_matrix Define Transition Matrix for Markov Model
plot.updated_model Run Model on New Data
poisson Probability Density Functions for Probabilistic Uncertainty Analysis
pool Pool Two or More Survival Distributions
pool_ Pool Two or More Survival Distributions
probability Convenience Functions to Compute Probabilities
prob_to_prob Convenience Functions to Compute Probabilities
project Project Beyond a Survival Distribution with Another
project_ Project Beyond a Survival Distribution with Another

-- R --

rate_to_prob Convenience Functions to Compute Probabilities
rescale_discount_rate Rescale Discount Rate
rescale_prob Convenience Functions to Compute Probabilities
rr_to_prob Convenience Functions to Compute Probabilities
run_dsa Run Sensitivity Analysis
run_model Run Markov Model
run_model_ Run Markov Model
run_model_tabular Run Analyses From Files
run_psa Run Probabilistic Uncertainty Analysis

-- S --

set_covariates Set Covariates of a Survival Distribution
set_covariates_ Set Covariates of a Survival Distribution
status_cluster Run 'heemod' on a Cluster
summary.run_model Summarise Markov Model Results

-- T --

triangle Probability Density Functions for Probabilistic Uncertainty Analysis

-- U --

update-model Run Model on New Data
update.run_model Run Model on New Data
use_cluster Run 'heemod' on a Cluster

-- W --

who-mortality Use WHO Mortality Rate