Spatial Analysis and Modelling


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Documentation for package ‘spatialEco’ version 0.1-5

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ants Ant Biodiversity Data
bearing.distance Bearing and Distance
breeding.density Breeding density areas (aka, core habitat areas)
concordance Concordance test for binomial models
conf.interval Confidence interval for mean or median
correlogram Correlogram
csi Cosine Similarity Index
daymet.point DAYMET point values
daymet.tiles DAYMET Tile ID's
DAYMET_tiles DAYMET climate tile index
dispersion Dispersion (H-prime)
download.daymet Download DAYMET
download.hansen Download Hansen Forest 2000-2013 Change
download.prism Download PRISM
effect.size Cohen's-d effect size
gaussian.kernel Gaussian Kernel
group.pdf Probability density plot by group
hexagons Hexagons
idw.smoothing idw.smoothing
insert.values Insert Values
kl.divergence Kullback-Leibler divergence (relative entropy)
land.metrics Landscape metrics for points and polygons
local.min.max Local minimum and maximum
loess.boot Loess Bootstrap
loess.ci Loess with confidence intervals
logistic.regression Logistic and Auto-logistic regression
moments moments
mwCorr Dutilleul moving window bivariate raster correlation
nni Average Nearest Neighbour Index (NNI)
o.ring Inhomogeneous O-ring
optimal.k optimalK
outliers Outliers
parea.sample Percent area sample
plot.effect.size Plot effect size
plot.loess.boot Plot Loess Bootstrap
point.in.poly Point and Polygon Intersect
polyPerimeter Polygon perimeter
pp.subsample Point process random subsample
print.effect.size Print effect size
print.loess.boot Print Loess bootstrap model
pseudo.absence Pseudo-absence random samples
pu Biodiversity Planning Units
raster.entropy Raster Entropy
raster.vol Raster Percent Volume
rasterCorrelation Raster correlation
sample.annulus Sample annulus
sample.line Systematic or random point sample of line(s)
sample.poly Sample Polygons
sampleTransect Sample transect
se.news spatialEco news
separability separability
shannons Shannon's Diversity (Entropy) Index
similarity Ecological similarity
sp.na.omit sp na.omit
stratified.random Stratified random sample
summary.effect.size Summarizing effect size
summary.loess.boot Summarizing Loess bootstrap models
tpi Topographic Position Index (tpi)
trend.line trend.line
tri Terrain Ruggedness Index
trig.trans Calculates the trigonomic slope and aspect transformation
vrm Vector Ruggedness Measure (VRM)
wt.centroid Weighted centroid
zonal.stats zonal.stats