Last updated on 2018-03-06 12:47:24 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.3 | 2.35 | 25.61 | 27.96 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.3 | 1.43 | 19.91 | 21.34 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.3 | 33.69 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.3 | 34.68 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.1.3 | 9.00 | 68.00 | 77.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.3 | 1.74 | 24.78 | 26.52 | ERROR | |
| r-patched-solaris-x86 | 0.1.3 | 43.80 | NOTE | |||
| r-release-linux-x86_64 | 0.1.3 | 1.62 | 24.99 | 26.61 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.1.3 | 8.00 | 62.00 | 70.00 | NOTE | |
| r-release-osx-x86_64 | 0.1.3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.3 | 6.00 | 44.00 | 50.00 | NOTE | |
| r-oldrel-osx-x86_64 | 0.1.3 | NOTE |
Version: 0.1.3
Check: R code for possible problems
Result: NOTE
plot.fkf: no visible global function definition for ‘rainbow’
plot.fkf: no visible global function definition for ‘qnorm’
plot.fkf: no visible global function definition for ‘qqnorm’
plot.fkf: no visible global function definition for ‘qchisq’
plot.fkf: no visible global function definition for ‘ppoints’
plot.fkf: no visible global function definition for ‘qqplot’
plot.fkf: no visible global function definition for ‘acf’
plot.fkf: no visible global function definition for ‘ccf’
Undefined global functions or variables:
acf ccf ppoints qchisq qnorm qqnorm qqplot rainbow
Consider adding
importFrom("grDevices", "rainbow")
importFrom("stats", "acf", "ccf", "ppoints", "qchisq", "qnorm",
"qqnorm", "qqplot")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.1.3
Check: line endings in Makefiles
Result: NOTE
Found the following Makefile(s) without a final LF:
src/Makevars
Some ‘make’ programs ignore lines not ending in LF.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.1.3
Check: compiled code
Result: NOTE
File ‘FKF/libs/FKF.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘doRUnit.R’ [1s/2s]
Running the tests in ‘tests/doRUnit.R’ failed.
Complete output:
> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+
+ ## --- Setup ---
+
+ pkg <- "FKF"
+ if(Sys.getenv("RCMDCHECK") == "FALSE") {
+ ## Path to unit tests for standalone running under Makefile (not R CMD check)
+ ## PKG/tests/../inst/unitTests
+ path <- file.path(getwd(), "..", "inst", "unitTests")
+ } else {
+ ## Path to unit tests for R CMD check
+ ## PKG.Rcheck/tests/../PKG/unitTests
+ path <- system.file(package=pkg, "unitTests")
+ }
+ cat("\nRunning unit tests\n")
+ print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+
+ library(package=pkg, character.only=TRUE)
+
+ ## If desired, load the name space to allow testing of private functions
+ ## if (is.element(pkg, loadedNamespaces()))
+ ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+ ##
+ ## or simply call PKG:::myPrivateFunction() in tests
+
+ ## --- Testing ---
+
+ ## Define tests
+ testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+ dirs=path)
+ ## Run
+ tests <- runTestSuite(testSuite)
+
+ ## Default report name
+ pathReport <- file.path(path, "report")
+
+ ## Report to stdout and text files
+ cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+ printTextProtocol(tests, showDetails=FALSE)
+ printTextProtocol(tests, showDetails=FALSE,
+ fileName=paste(pathReport, "Summary.txt", sep=""))
+ printTextProtocol(tests, showDetails=TRUE,
+ fileName=paste(pathReport, ".txt", sep=""))
+
+ ## Report to HTML file
+ printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+
+ ## Return stop() to cause R CMD check stop in case of
+ ## - failures i.e. FALSE to unit tests or
+ ## - errors i.e. R errors
+ tmp <- getErrors(tests)
+ if(tmp$nFail > 0 | tmp$nErr > 0) {
+ stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+ ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
+ }
+ } else {
+ warning("cannot run unit tests -- package RUnit is not available")
+ }
Running unit tests
$pkg
[1] "FKF"
$getwd
[1] "/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/FKF.Rcheck/tests"
$pathToUnitTests
[1] "/tmp/Rtmp8AnnEK/RLIBS_2e78359735a2/FKF/unitTests"
Executing test function test.compare.to.stats ... done successfully.
------------------- UNIT TEST SUMMARY ---------------------
RUNIT TEST PROTOCOL -- Tue Mar 6 05:00:53 2018
***********************************************
Number of test functions: 1
Number of errors: 0
Number of failures: 0
1 Test Suite :
FKF unit testing - 1 test function, 0 errors, 0 failures
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: printTextProtocol -> cat -> file
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
cannot open file '/tmp/Rtmp8AnnEK/RLIBS_2e78359735a2/FKF/unitTests/reportSummary.txt': Read-only file system
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘doRUnit.R’ [1s/2s]
Running the tests in ‘tests/doRUnit.R’ failed.
Complete output:
> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+
+ ## --- Setup ---
+
+ pkg <- "FKF"
+ if(Sys.getenv("RCMDCHECK") == "FALSE") {
+ ## Path to unit tests for standalone running under Makefile (not R CMD check)
+ ## PKG/tests/../inst/unitTests
+ path <- file.path(getwd(), "..", "inst", "unitTests")
+ } else {
+ ## Path to unit tests for R CMD check
+ ## PKG.Rcheck/tests/../PKG/unitTests
+ path <- system.file(package=pkg, "unitTests")
+ }
+ cat("\nRunning unit tests\n")
+ print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+
+ library(package=pkg, character.only=TRUE)
+
+ ## If desired, load the name space to allow testing of private functions
+ ## if (is.element(pkg, loadedNamespaces()))
+ ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+ ##
+ ## or simply call PKG:::myPrivateFunction() in tests
+
+ ## --- Testing ---
+
+ ## Define tests
+ testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+ dirs=path)
+ ## Run
+ tests <- runTestSuite(testSuite)
+
+ ## Default report name
+ pathReport <- file.path(path, "report")
+
+ ## Report to stdout and text files
+ cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+ printTextProtocol(tests, showDetails=FALSE)
+ printTextProtocol(tests, showDetails=FALSE,
+ fileName=paste(pathReport, "Summary.txt", sep=""))
+ printTextProtocol(tests, showDetails=TRUE,
+ fileName=paste(pathReport, ".txt", sep=""))
+
+ ## Report to HTML file
+ printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+
+ ## Return stop() to cause R CMD check stop in case of
+ ## - failures i.e. FALSE to unit tests or
+ ## - errors i.e. R errors
+ tmp <- getErrors(tests)
+ if(tmp$nFail > 0 | tmp$nErr > 0) {
+ stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+ ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
+ }
+ } else {
+ warning("cannot run unit tests -- package RUnit is not available")
+ }
Running unit tests
$pkg
[1] "FKF"
$getwd
[1] "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/FKF.Rcheck/tests"
$pathToUnitTests
[1] "/home/hornik/tmp/scratch/RtmpXUOxhF/RLIBS_353728137286/FKF/unitTests"
Executing test function test.compare.to.stats ... done successfully.
------------------- UNIT TEST SUMMARY ---------------------
RUNIT TEST PROTOCOL -- Tue Mar 6 04:21:00 2018
***********************************************
Number of test functions: 1
Number of errors: 0
Number of failures: 0
1 Test Suite :
FKF unit testing - 1 test function, 0 errors, 0 failures
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: printTextProtocol -> cat -> file
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
cannot open file '/home/hornik/tmp/scratch/RtmpXUOxhF/RLIBS_353728137286/FKF/unitTests/reportSummary.txt': Read-only file system
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘doRUnit.R’ [2s/2s]
Running the tests in ‘tests/doRUnit.R’ failed.
Complete output:
> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+
+ ## --- Setup ---
+
+ pkg <- "FKF"
+ if(Sys.getenv("RCMDCHECK") == "FALSE") {
+ ## Path to unit tests for standalone running under Makefile (not R CMD check)
+ ## PKG/tests/../inst/unitTests
+ path <- file.path(getwd(), "..", "inst", "unitTests")
+ } else {
+ ## Path to unit tests for R CMD check
+ ## PKG.Rcheck/tests/../PKG/unitTests
+ path <- system.file(package=pkg, "unitTests")
+ }
+ cat("\nRunning unit tests\n")
+ print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+
+ library(package=pkg, character.only=TRUE)
+
+ ## If desired, load the name space to allow testing of private functions
+ ## if (is.element(pkg, loadedNamespaces()))
+ ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+ ##
+ ## or simply call PKG:::myPrivateFunction() in tests
+
+ ## --- Testing ---
+
+ ## Define tests
+ testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+ dirs=path)
+ ## Run
+ tests <- runTestSuite(testSuite)
+
+ ## Default report name
+ pathReport <- file.path(path, "report")
+
+ ## Report to stdout and text files
+ cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+ printTextProtocol(tests, showDetails=FALSE)
+ printTextProtocol(tests, showDetails=FALSE,
+ fileName=paste(pathReport, "Summary.txt", sep=""))
+ printTextProtocol(tests, showDetails=TRUE,
+ fileName=paste(pathReport, ".txt", sep=""))
+
+ ## Report to HTML file
+ printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+
+ ## Return stop() to cause R CMD check stop in case of
+ ## - failures i.e. FALSE to unit tests or
+ ## - errors i.e. R errors
+ tmp <- getErrors(tests)
+ if(tmp$nFail > 0 | tmp$nErr > 0) {
+ stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+ ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
+ }
+ } else {
+ warning("cannot run unit tests -- package RUnit is not available")
+ }
Running unit tests
$pkg
[1] "FKF"
$getwd
[1] "/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/FKF.Rcheck/tests"
$pathToUnitTests
[1] "/tmp/RtmpHjClai/RLIBS_71af74ba1c2d/FKF/unitTests"
Executing test function test.compare.to.stats ... done successfully.
------------------- UNIT TEST SUMMARY ---------------------
RUNIT TEST PROTOCOL -- Mon Mar 5 04:49:49 2018
***********************************************
Number of test functions: 1
Number of errors: 0
Number of failures: 0
1 Test Suite :
FKF unit testing - 1 test function, 0 errors, 0 failures
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: printTextProtocol -> cat -> file
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
cannot open file '/tmp/RtmpHjClai/RLIBS_71af74ba1c2d/FKF/unitTests/reportSummary.txt': Read-only file system
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘doRUnit.R’ [2s/2s]
Running the tests in ‘tests/doRUnit.R’ failed.
Complete output:
> ## unit tests will not be done if RUnit is not available
> if(require("RUnit", quietly=TRUE)) {
+
+ ## --- Setup ---
+
+ pkg <- "FKF"
+ if(Sys.getenv("RCMDCHECK") == "FALSE") {
+ ## Path to unit tests for standalone running under Makefile (not R CMD check)
+ ## PKG/tests/../inst/unitTests
+ path <- file.path(getwd(), "..", "inst", "unitTests")
+ } else {
+ ## Path to unit tests for R CMD check
+ ## PKG.Rcheck/tests/../PKG/unitTests
+ path <- system.file(package=pkg, "unitTests")
+ }
+ cat("\nRunning unit tests\n")
+ print(list(pkg=pkg, getwd=getwd(), pathToUnitTests=path))
+
+ library(package=pkg, character.only=TRUE)
+
+ ## If desired, load the name space to allow testing of private functions
+ ## if (is.element(pkg, loadedNamespaces()))
+ ## attach(loadNamespace(pkg), name=paste("namespace", pkg, sep=":"), pos=3)
+ ##
+ ## or simply call PKG:::myPrivateFunction() in tests
+
+ ## --- Testing ---
+
+ ## Define tests
+ testSuite <- defineTestSuite(name=paste(pkg, "unit testing"),
+ dirs=path)
+ ## Run
+ tests <- runTestSuite(testSuite)
+
+ ## Default report name
+ pathReport <- file.path(path, "report")
+
+ ## Report to stdout and text files
+ cat("------------------- UNIT TEST SUMMARY ---------------------\n\n")
+ printTextProtocol(tests, showDetails=FALSE)
+ printTextProtocol(tests, showDetails=FALSE,
+ fileName=paste(pathReport, "Summary.txt", sep=""))
+ printTextProtocol(tests, showDetails=TRUE,
+ fileName=paste(pathReport, ".txt", sep=""))
+
+ ## Report to HTML file
+ printHTMLProtocol(tests, fileName=paste(pathReport, ".html", sep=""))
+
+ ## Return stop() to cause R CMD check stop in case of
+ ## - failures i.e. FALSE to unit tests or
+ ## - errors i.e. R errors
+ tmp <- getErrors(tests)
+ if(tmp$nFail > 0 | tmp$nErr > 0) {
+ stop(paste("\n\nunit testing failed (#test failures: ", tmp$nFail,
+ ", #R errors: ", tmp$nErr, ")\n\n", sep=""))
+ }
+ } else {
+ warning("cannot run unit tests -- package RUnit is not available")
+ }
Running unit tests
$pkg
[1] "FKF"
$getwd
[1] "/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/FKF.Rcheck/tests"
$pathToUnitTests
[1] "/tmp/RtmpC5nxpY/RLIBS_7a7d4f0d0aa9/FKF/unitTests"
Executing test function test.compare.to.stats ... done successfully.
------------------- UNIT TEST SUMMARY ---------------------
RUNIT TEST PROTOCOL -- Mon Mar 5 16:48:59 2018
***********************************************
Number of test functions: 1
Number of errors: 0
Number of failures: 0
1 Test Suite :
FKF unit testing - 1 test function, 0 errors, 0 failures
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: printTextProtocol -> cat -> file
In addition: Warning message:
In file(file, ifelse(append, "a", "w")) :
cannot open file '/tmp/RtmpC5nxpY/RLIBS_7a7d4f0d0aa9/FKF/unitTests/reportSummary.txt': Read-only file system
Execution halted
Flavor: r-release-linux-x86_64