Last updated on 2018-05-07 13:47:48 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | ERROR | |||||
| r-devel-linux-x86_64-debian-gcc | 1.0.3 | 3.35 | 22.49 | 25.84 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.3 | 39.05 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.3 | 37.73 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.0.3 | 9.00 | 54.00 | 63.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0.3 | 3.18 | 27.85 | 31.03 | ERROR | |
| r-patched-solaris-x86 | 1.0.3 | 54.70 | NOTE | |||
| r-release-linux-x86_64 | 1.0.3 | 3.97 | 27.69 | 31.66 | ERROR | |
| r-release-windows-ix86+x86_64 | 1.0.3 | 9.00 | 54.00 | 63.00 | NOTE | |
| r-release-osx-x86_64 | 1.0.3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.3 | 5.00 | 57.00 | 62.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.0.3 | NOTE |
Version: 1.0.3
Check: top-level files
Result: NOTE
Non-standard file/directory found at top level:
‘scripts’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.0.3
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
plot.fwdglm plot.fwdlm plot.fwdsco print.fwdglm print.fwdlm
print.fwdsco print.summary.fwdglm print.summary.fwdlm
print.summary.fwdsco summary.fwdglm summary.fwdlm summary.fwdsco
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 1.0.3
Check: R code for possible problems
Result: NOTE
fwdglm: no visible global function definition for ‘is.empty.model’
fwdglm: no visible global function definition for ‘model.matrix’
fwdglm: no visible global function definition for ‘model.response’
fwdglm: no visible global function definition for ‘model.weights’
fwdglm: no visible global function definition for ‘model.offset’
fwdglm: no visible global function definition for ‘glm.fit’
fwdglm: no visible global function definition for ‘glm.control’
fwdlm: no visible global function definition for ‘model.response’
fwdlm: no visible global function definition for ‘model.matrix’
fwdlm: no visible global function definition for ‘lm.fit’
fwdsco: no visible global function definition for ‘model.response’
fwdsco: no visible global function definition for ‘model.matrix’
fwdsco: no visible global function definition for ‘lm.fit’
lmsglm : subset.median: no visible global function definition for
‘glm.fit’
lmsglm : subset.median: no visible global function definition for
‘glm.control’
lmsglm : subset.median: no visible global function definition for
‘median’
lmsglm: no visible global function definition for ‘na.omit’
lmsglm: no visible global function definition for ‘glm.fit’
lmsglm: no visible global function definition for ‘glm.control’
plot.fwdglm: no visible global function definition for ‘par’
plot.fwdglm: no visible global function definition for ‘plot’
plot.fwdglm: no visible global function definition for ‘lines’
plot.fwdglm: no visible global function definition for ‘text’
plot.fwdglm: no visible global function definition for ‘points’
plot.fwdglm : <anonymous>: no visible global function definition for
‘na.omit’
plot.fwdglm: no visible global function definition for ‘legend’
plot.fwdglm: no visible global function definition for ‘abline’
plot.fwdglm: no visible global function definition for ‘axis’
plot.fwdlm: no visible global function definition for ‘par’
plot.fwdlm: no visible global function definition for ‘plot’
plot.fwdlm: no visible global function definition for ‘lines’
plot.fwdlm: no visible global function definition for ‘text’
plot.fwdlm: no visible global function definition for ‘points’
plot.fwdlm: no visible global function definition for ‘na.omit’
plot.fwdlm: no visible global function definition for ‘abline’
plot.fwdsco: no visible global function definition for ‘par’
plot.fwdsco: no visible global function definition for ‘plot’
plot.fwdsco: no visible global function definition for ‘lines’
plot.fwdsco: no visible global function definition for ‘text’
plot.fwdsco: no visible global function definition for ‘abline’
plot.fwdsco: no visible global function definition for ‘points’
Undefined global functions or variables:
abline axis glm.control glm.fit is.empty.model legend lines lm.fit
median model.matrix model.offset model.response model.weights na.omit
par plot points text
Consider adding
importFrom("graphics", "abline", "axis", "legend", "lines", "par",
"plot", "points", "text")
importFrom("stats", "glm.control", "glm.fit", "is.empty.model",
"lm.fit", "median", "model.matrix", "model.offset",
"model.response", "model.weights", "na.omit")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0.3
Check: Rd line widths
Result: NOTE
Rd file 'lmsglm.Rd':
\usage lines wider than 90 characters:
lmsglm(x, y, family, weights, offset, n.samples = 100, max.samples = 200, epsilon = 1e-04, maxit = 50, trace = FALSE)
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.0.3
Check: examples
Result: ERROR
Running examples in ‘forward-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: fwdglm
> ### Title: Forward Search in Generalized Linear Models
> ### Aliases: fwdglm print.fwdglm
> ### Keywords: robust regression models
>
> ### ** Examples
>
> data(cellular)
> cellular$TNF <- as.factor(cellular$TNF)
> cellular$IFN <- as.factor(cellular$IFN)
> mod <- fwdglm(y ~ TNF + IFN, data=cellular, family=poisson(log), nsamp=200)
lmsglm: found 6 good subsets after trying 10.
lmsglm: found 7 good subsets after trying 20.
lmsglm: found 13 good subsets after trying 30.
lmsglm: found 18 good subsets after trying 40.
lmsglm: found 22 good subsets after trying 50.
lmsglm: found 25 good subsets after trying 60.
lmsglm: found 28 good subsets after trying 70.
lmsglm: found 30 good subsets after trying 80.
lmsglm: found 33 good subsets after trying 90.
lmsglm: found 38 good subsets after trying 100.
lmsglm: found 46 good subsets after trying 110.
lmsglm: found 48 good subsets after trying 120.
lmsglm: found 52 good subsets after trying 130.
lmsglm: found 56 good subsets after trying 140.
lmsglm: found 62 good subsets after trying 150.
lmsglm: found 64 good subsets after trying 160.
lmsglm: found 69 good subsets after trying 170.
lmsglm: found 71 good subsets after trying 180.
lmsglm: found 76 good subsets after trying 190.
lmsglm: found 82 good subsets after trying 200.
lmsglm: found 84 good subsets after trying 210.
lmsglm: found 87 good subsets after trying 220.
lmsglm: found 90 good subsets after trying 230.
lmsglm: found 94 good subsets after trying 240.
lmsglm: found 99 good subsets after trying 250.
lmsglm: found 104 good subsets after trying 260.
lmsglm: found 109 good subsets after trying 270.
lmsglm: found 112 good subsets after trying 280.
lmsglm: found 116 good subsets after trying 290.
lmsglm: found 120 good subsets after trying 300.
lmsglm: found 124 good subsets after trying 310.
lmsglm: found 126 good subsets after trying 320.
lmsglm: found 128 good subsets after trying 330.
lmsglm: found 132 good subsets after trying 340.
lmsglm: found 132 good subsets after trying 350.
lmsglm: found 137 good subsets after trying 360.
lmsglm: found 140 good subsets after trying 370.
lmsglm: found 142 good subsets after trying 380.
lmsglm: found 144 good subsets after trying 390.
lmsglm: found 149 good subsets after trying 400.
*** Starting Forward Search ***
fwdglm: finished 10 steps out of 16.
> summary(mod)
Length Class Mode
call 5 -none- call
Residuals 160 -none- numeric
Unit 50 -none- numeric
included 10 -none- list
Coefficients 70 -none- numeric
tStatistics 70 -none- numeric
Leverage 160 -none- numeric
MaxRes 20 -none- numeric
MinDelRes 18 -none- numeric
ScoreTest 9 -none- numeric
Likelihood 40 -none- numeric
CookDist 9 -none- numeric
ModCookDist 45 -none- numeric
Weights 160 -none- numeric
inibsb 7 -none- numeric
binary.response 1 -none- logical
> ## Not run: plot(mod)
> plot(mod, 1)
Error in xy.coords(x, y, xlabel, ylabel, log) :
'x' and 'y' lengths differ
Calls: plot -> plot.default -> xy.coords
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64