CRAN Package Check Results for Package AlignStat

Last updated on 2018-06-01 08:48:40 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.1 11.84 30.92 42.76 ERROR
r-devel-linux-x86_64-debian-gcc 1.3.1 10.40 26.40 36.80 ERROR
r-devel-linux-x86_64-fedora-clang 1.3.1 62.35 NOTE
r-devel-linux-x86_64-fedora-gcc 1.3.1 57.18 NOTE
r-devel-windows-ix86+x86_64 1.3.1 45.00 106.00 151.00 OK
r-patched-linux-x86_64 1.3.1 13.09 31.13 44.22 ERROR
r-patched-solaris-x86 1.3.1 78.60 OK
r-release-linux-x86_64 1.3.1 14.37 30.78 45.15 ERROR
r-release-windows-ix86+x86_64 1.3.1 30.00 72.00 102.00 OK
r-release-osx-x86_64 1.3.1 OK
r-oldrel-windows-ix86+x86_64 1.3.1 42.00 104.00 146.00 OK
r-oldrel-osx-x86_64 1.3.1 OK

Check Details

Version: 1.3.1
Check: compiled code
Result: NOTE
    File ‘AlignStat/libs/AlignStat.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.3.1
Check: examples
Result: ERROR
    Running examples in ‘AlignStat-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: plot_similarity_summary
    > ### Title: A line plot summary of column similarity between two multiple
    > ### sequence alignments
    > ### Aliases: plot_similarity_summary
    >
    > ### ** Examples
    >
    > data(reference_alignment)
    > data(comparison_alignment)
    > PAC <- compare_alignments(reference_alignment, comparison_alignment, CS=TRUE)
    > plot_similarity_summary(PAC, CS=TRUE, cys=TRUE)
    Error in if (!is.na(x$column_score)) { : the condition has length > 1
    Calls: plot_similarity_summary
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64