Last updated on 2018-06-01 08:48:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3 | 0.97 | 15.58 | 16.55 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.3 | 0.60 | 13.81 | 14.41 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3 | 23.86 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3 | 22.31 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.3 | 3.00 | 27.00 | 30.00 | OK | |
| r-patched-linux-x86_64 | 0.3 | 0.80 | 16.00 | 16.80 | ERROR | |
| r-patched-solaris-x86 | 0.3 | 35.90 | OK | |||
| r-release-linux-x86_64 | 0.3 | 0.96 | 15.86 | 16.82 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.3 | 3.00 | 28.00 | 31.00 | OK | |
| r-release-osx-x86_64 | 0.3 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.3 | 2.00 | 33.00 | 35.00 | OK | |
| r-oldrel-osx-x86_64 | 0.3 | OK |
Version: 0.3
Check: examples
Result: ERROR
Running examples in ‘EMVC-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: EMVC
> ### Title: Entropy Minimization over Variable Clusters (EMVC) algorithm
> ### Aliases: EMVC
> ### Keywords: file
>
> ### ** Examples
>
> ## Create random sparse annotation matrix for 50 variable groups
> ## and 100 variables
> annotations = matrix(rbinom(5000,1,.1), nrow=50, ncol=100)
>
> ## Number of initial annotations
> sum(annotations)
[1] 536
>
> ## Create random gene expression matrix for 50 observations and 100 variables
> data = matrix(rnorm(5000), nrow=50, ncol=100)
>
> ## Execute EMVC using k-means
> EMVC.results = EMVC(data=data, annotations=annotations,
+ bootstrap.iter=30, k.range=2:10, clust.method="kmeans",
+ kmeans.nstart=3, kmeans.iter.max=10)
Error in if (is.na(params$k.range)) { : the condition has length > 1
Calls: EMVC -> checkOptimizeAnnotationArgs
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64