CRAN Package Check Results for Package AdaptiveSparsity

Last updated on 2018-06-17 19:49:27 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4 17.08 22.99 40.07 ERROR
r-devel-linux-x86_64-debian-gcc 1.4 13.40 18.25 31.65 ERROR
r-devel-linux-x86_64-fedora-clang 1.4 52.11 NOTE
r-devel-linux-x86_64-fedora-gcc 1.4 45.69 NOTE
r-devel-windows-ix86+x86_64 1.4 41.00 65.00 106.00 NOTE
r-patched-linux-x86_64 1.4 15.69 20.94 36.63 ERROR
r-patched-solaris-x86 1.4 59.70 NOTE
r-release-linux-x86_64 1.4 14.66 20.76 35.42 ERROR
r-release-windows-ix86+x86_64 1.4 43.00 54.00 97.00 NOTE
r-release-osx-x86_64 1.4 NOTE
r-oldrel-windows-ix86+x86_64 1.4 27.00 61.00 88.00 NOTE
r-oldrel-osx-x86_64 1.4 NOTE

Check Details

Version: 1.4
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘MASS’ ‘Matrix’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Package in Depends field not imported from: ‘Rcpp’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.4
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     asggm.default asggm.formula aslm.default aslm.formula logLik.aslm
     nobs.aslm predict.aslm print.aslm print.summary.aslm summary.aslm
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.4
Check: R code for possible problems
Result: NOTE
    asggm.formula: no visible global function definition for ‘model.frame’
    asggm.formula: no visible global function definition for ‘model.matrix’
    asggm.formula: no visible global function definition for
     ‘model.response’
    aslm.formula: no visible binding for global variable ‘na.omit’
    aslm.formula: no visible global function definition for ‘model.frame’
    aslm.formula: no visible global function definition for ‘model.matrix’
    aslm.formula: no visible global function definition for
     ‘model.response’
    figEM: no visible global function definition for ‘rnorm’
    fit.ols.lm: no visible global function definition for ‘lm.fit’
    genData: no visible global function definition for ‘rnorm’
    genL: no visible global function definition for ‘runif’
    genL: no visible global function definition for ‘rnorm’
    getSparseModel: no visible global function definition for ‘update’
    getSparseModel: no visible global function definition for ‘formula’
    getSparseModel: no visible global function definition for ‘lm’
    init.rnorm: no visible global function definition for ‘rnorm’
    init.runif: no visible global function definition for ‘runif’
    predict.aslm: no visible global function definition for ‘fitted’
    predict.aslm: no visible global function definition for ‘model.matrix’
    predict.aslm: no visible global function definition for ‘coef’
    print.summary.aslm: no visible global function definition for ‘formula’
    print.summary.aslm: no visible global function definition for
     ‘printCoefmat’
    rCSL: no visible global function definition for ‘cov’
    rCSL: no visible global function definition for ‘ginv’
    rCSL: no visible global function definition for ‘expand’
    rCSL: no visible global function definition for ‘lu’
    summary.aslm: no visible global function definition for ‘formula’
    Undefined global functions or variables:
     coef cov expand fitted formula ginv lm lm.fit lu model.frame
     model.matrix model.response na.omit printCoefmat rnorm runif update
    Consider adding
     importFrom("stats", "coef", "cov", "fitted", "formula", "lm", "lm.fit",
     "model.frame", "model.matrix", "model.response", "na.omit",
     "printCoefmat", "rnorm", "runif", "update")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.4
Check: compiled code
Result: NOTE
    File ‘AdaptiveSparsity/libs/AdaptiveSparsity.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.4
Check: examples
Result: ERROR
    Running examples in ‘AdaptiveSparsity-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: aslm
    > ### Title: Adaptive Sparse Linear Model
    > ### Aliases: aslm getSparseModel aslm.formula aslm.default
    > ### Keywords: classes models multivariate
    >
    > ### ** Examples
    >
    > s = aslm(Infant.Mortality~.,data=swiss)
    Error in UseMethod("aslm") :
     no applicable method for 'aslm' applied to an object of class "formula"
    Calls: aslm
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64