CRAN Package Check Results for Package genlasso

Last updated on 2018-06-29 16:51:24 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3 8.97 115.57 124.54 WARN
r-devel-linux-x86_64-debian-gcc 1.3 6.94 89.99 96.93 WARN
r-devel-linux-x86_64-fedora-clang 1.3 150.45 WARN
r-devel-linux-x86_64-fedora-gcc 1.3 144.23 WARN
r-devel-windows-ix86+x86_64 1.3 22.00 195.00 217.00 WARN
r-patched-linux-x86_64 1.3 WARN
r-patched-solaris-x86 1.3 179.70 WARN
r-release-linux-x86_64 1.3 7.91 101.78 109.69 WARN
r-release-windows-ix86+x86_64 1.3 23.00 139.00 162.00 WARN
r-release-osx-x86_64 1.3 WARN
r-oldrel-windows-ix86+x86_64 1.3 16.00 181.00 197.00 WARN
r-oldrel-osx-x86_64 1.3 NOTE

Check Details

Version: 1.3
Check: R code for possible problems
Result: NOTE
    checkrows: no visible global function definition for ‘rnorm’
    cv.trendfilter: no visible binding for global variable ‘sd’
    plot.cv.trendfilter: no visible global function definition for ‘plot’
    plot.cv.trendfilter: no visible global function definition for ‘lines’
    plot.cv.trendfilter: no visible global function definition for ‘points’
    plot.cv.trendfilter: no visible global function definition for ‘legend’
    plot.gcv.genlasso: no visible global function definition for ‘plot’
    plot.gcv.genlasso: no visible global function definition for ‘points’
    plot.genlasso: no visible global function definition for ‘par’
    plot.genlasso: no visible global function definition for ‘rainbow’
    plot.genlasso: no visible global function definition for ‘plot’
    plot.genlasso: no visible global function definition for ‘matplot’
    plot.genlasso: no visible global function definition for ‘abline’
    plot.genlasso: no visible global function definition for ‘text’
    plot.genlasso: no visible global function definition for ‘lines’
    plot.trendfilter: no visible global function definition for ‘plot’
    plot.trendfilter: no visible global function definition for ‘matplot’
    predict.genlasso: no visible global function definition for ‘coef’
    softthresh: no visible global function definition for ‘coef’
    Undefined global functions or variables:
     abline coef legend lines matplot par plot points rainbow rnorm sd
     text
    Consider adding
     importFrom("grDevices", "rainbow")
     importFrom("graphics", "abline", "legend", "lines", "matplot", "par",
     "plot", "points", "text")
     importFrom("stats", "coef", "rnorm", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: compiled code
Result: NOTE
    File ‘genlasso/libs/genlasso.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.3
Check: examples
Result: WARN
    Found the following significant warnings:
    
     Warning: 'rBind' is deprecated.
    Deprecated functions may be defunct as soon as of the next release of
    R.
    See ?Deprecated.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64

Version: 1.3
Check: running examples for arch ‘i386’
Result: WARN
    Found the following significant warnings:
    
     Warning: 'rBind' is deprecated.
    Deprecated functions may be defunct as soon as of the next release of
    R.
    See ?Deprecated.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.3
Check: running examples for arch ‘x64’
Result: WARN
    Found the following significant warnings:
    
     Warning: 'rBind' is deprecated.
    Deprecated functions may be defunct as soon as of the next release of
    R.
    See ?Deprecated.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.3
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
    
    The following objects are masked from ‘package:stats’:
    
     decompose, spectrum
    
    The following object is masked from ‘package:base’:
    
     union
    
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'article.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `utf8x.def' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: def)
    
    ! Emergency stop.
    <read *>
    
    l.158 \endinput
     ^^M
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-oldrel-osx-x86_64