Last updated on 2018-07-20 09:48:57 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2-7 | 2.81 | 34.31 | 37.12 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2-7 | 1.94 | 30.61 | 32.55 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2-7 | 50.46 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2-7 | 48.49 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.2-7 | 5.00 | 74.00 | 79.00 | NOTE | |
| r-patched-linux-x86_64 | 0.2-7 | 2.12 | 39.37 | 41.49 | ERROR | |
| r-patched-solaris-x86 | 0.2-7 | 79.10 | NOTE | |||
| r-release-linux-x86_64 | 0.2-7 | 2.88 | 39.56 | 42.44 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.2-7 | 6.00 | 49.00 | 55.00 | NOTE | |
| r-release-osx-x86_64 | 0.2-7 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.2-7 | 5.00 | 48.00 | 53.00 | NOTE | |
| r-oldrel-osx-x86_64 | 0.2-7 | NOTE |
Version: 0.2-7
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
coef.plsdof vcov.plsdof
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 0.2-7
Check: R code for possible problems
Result: NOTE
compute.lower.bound: no visible global function definition for ‘cor’
kernel.pls.fit: no visible binding for global variable ‘sd’
linear.pls.fit: no visible binding for global variable ‘sd’
pcr: no visible binding for global variable ‘sd’
pcr: no visible global function definition for ‘cor’
pcr.cv: no visible global function definition for ‘cor’
pcr.cv: no visible global function definition for ‘plot’
pls.model: no visible binding for global variable ‘sd’
ridge.cv: no visible global function definition for ‘coef’
ridge.cv: no visible global function definition for ‘cor’
ridge.cv: no visible global function definition for ‘plot’
Undefined global functions or variables:
coef cor plot sd
Consider adding
importFrom("graphics", "plot")
importFrom("stats", "coef", "cor", "sd")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.2-7
Check: examples
Result: ERROR
Running examples in ‘plsdof-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plsdof-package
> ### Title: Degrees of Freedom and Statistical Inference for Partial Least
> ### Squares Regression
> ### Aliases: plsdof-package plsdof
> ### Keywords: package
>
> ### ** Examples
>
> # Boston Housing data
> data(Boston)
> X<-as.matrix(Boston[,-14])
> y<-as.vector(Boston[,14])
>
> # compute PLS coefficients for the first 5 components and plot Degrees of Freedom
>
> my.pls1<-pls.model(X,y,m=5,compute.DoF=TRUE)
>
> plot(0:5,my.pls1$DoF,pch="*",cex=3,xlab="components",ylab="DoF",ylim=c(0,14))
>
> # add naive estimate
> lines(0:5,1:6,lwd=3)
>
> # model selection with the Bayesian Information criterion
>
> mypls2<-pls.ic(X,y,criterion="bic")
>
> # model selection based on cross-validation.
> # returns the estimated covariance matrix of the regression coefficients
>
> mypls3<-pls.cv(X,y,compute.covariance=TRUE)
> my.vcov<-vcov(mypls3)
Error in UseMethod("vcov") :
no applicable method for 'vcov' applied to an object of class "plsdof"
Calls: vcov
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64