CRAN Package Check Results for Package survClip

Last updated on 2018-09-11 11:48:31 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.3 27.05 382.72 409.77 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.3 26.43 309.70 336.13 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.3 510.48 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.3 515.47 NOTE
r-devel-windows-ix86+x86_64 0.2.3 50.00 354.00 404.00 NOTE
r-patched-linux-x86_64 0.2.3 24.10 313.04 337.14 NOTE
r-patched-solaris-x86 0.2.3 627.90 NOTE
r-release-linux-x86_64 0.2.3 20.15 311.10 331.25 NOTE
r-release-windows-ix86+x86_64 0.2.3 45.00 322.00 367.00 NOTE
r-release-osx-x86_64 0.2.3 ERROR
r-oldrel-windows-ix86+x86_64 0.2.3 58.00 411.00 469.00 NOTE
r-oldrel-osx-x86_64 0.2.3 ERROR

Check Details

Version: 0.2.3
Check: files in ‘vignettes’
Result: NOTE
    Files named as vignettes but with no recognized vignette engine:
     ‘vignettes/survClip.Rnw’
    (Is a VignetteBuilder field missing?)
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 0.2.3
Check: package dependencies
Result: ERROR
    Packages required but not available: ‘clipper’ ‘qpgraph’
    
    Packages suggested but not available for checking:
     ‘graphite’ ‘curatedOvarianData’ ‘BiocStyle’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 0.2.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'curatedOvarianData'
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.2.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     ‘graphite’ ‘curatedOvarianData’ ‘BiocStyle’ ‘org.Hs.eg.db’
Flavor: r-oldrel-osx-x86_64

Version: 0.2.3
Check: tests
Result: ERROR
     Running ‘runTests.R’ [11s/11s]
    Running the tests in ‘tests/runTests.R’ failed.
    Last 13 lines of output:
     Test files with failing tests
    
     test_cliqueSurvivalTest.R
     /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/survClip.Rcheck/survClip/unitTests/test_cliqueSurvivalTest.R
    
     test_computePCs.R
     /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/survClip.Rcheck/survClip/unitTests/test_computePCs.R
    
     test_pathwaySurvivalTest.R
     /Volumes/SSD-Data/Builds/R-dev-web/QA/Simon/packages/el-capitan-x86_64/results/3.4/survClip.Rcheck/survClip/unitTests/test_pathwaySurvivalTest.R
    
    
     Error in BiocGenerics:::testPackage("survClip") :
     unit tests failed for package survClip
     Execution halted
Flavor: r-oldrel-osx-x86_64