Last updated on 2019-01-24 08:48:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0 | 2.27 | 33.28 | 35.55 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0 | 1.72 | 25.29 | 27.01 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0 | 42.45 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0 | 40.34 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.0 | 9.00 | 61.00 | 70.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0 | 2.22 | 31.27 | 33.49 | NOTE | |
| r-patched-solaris-x86 | 1.0 | 56.60 | NOTE | |||
| r-release-linux-x86_64 | 1.0 | 2.11 | 31.15 | 33.26 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.0 | 4.00 | 59.00 | 63.00 | NOTE | |
| r-release-osx-x86_64 | 1.0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0 | 8.00 | 65.00 | 73.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.0 | NOTE |
Version: 1.0
Check: DESCRIPTION meta-information
Result: NOTE
BugReports field is not a suitable URL but appears to contain an email address
not specified by mailto: nor contained in < >
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: dependencies in R code
Result: NOTE
'library' or 'require' call to ‘lpSolveAPI’ which was already attached by Depends.
Please remove these calls from your code.
Packages in Depends field not imported from:
‘genetics’ ‘lpSolveAPI’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: R code for possible problems
Result: NOTE
alleleEnrichment: no visible binding for global variable ‘na.omit’
alleleEnrichment: no visible binding for global variable ‘na.pass’
alleleEnrichment: no visible global function definition for
‘write.table’
alleleEnrichment.data.alleles: no visible binding for global variable
‘na.omit’
alleleEnrichment.data.alleles: no visible binding for global variable
‘na.pass’
alleleEnrichment.data.alleles : <anonymous>: no visible global function
definition for ‘allele.count’
alleleEnrichment.data.alleles: no visible global function definition
for ‘runif’
alleleEnrichment.data.pheno: no visible global function definition for
‘read.table’
alleleEnrichment.lp: no visible global function definition for
‘make.lp’
alleleEnrichment.lp : <anonymous>: no visible global function
definition for ‘set.column’
alleleEnrichment.lp : <anonymous>: no visible global function
definition for ‘set.type’
alleleEnrichment.lp: no visible global function definition for
‘set.objfn’
alleleEnrichment.lp: no visible global function definition for
‘set.constr.type’
alleleEnrichment.lp: no visible global function definition for
‘set.rhs’
alleleEnrichment.lp: no visible global function definition for
‘lp.control’
alleleEnrichment.lp: no visible global function definition for
‘get.variables’
getGenotypes : <anonymous>: no visible global function definition for
‘genotype’
getRefAlleles: no visible global function definition for ‘read.table’
getSnpWeights: no visible global function definition for ‘read.table’
readMapfile: no visible global function definition for ‘read.table’
Undefined global functions or variables:
allele.count genotype get.variables lp.control make.lp na.omit
na.pass read.table runif set.column set.constr.type set.objfn set.rhs
set.type write.table
Consider adding
importFrom("stats", "na.omit", "na.pass", "runif")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64