CRAN Package Check Results for Package uniCox

Last updated on 2019-01-26 15:47:54 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 4.91 93.08 97.99 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 3.61 69.10 72.71 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 126.28 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 122.31 NOTE
r-devel-windows-ix86+x86_64 1.0 10.00 282.00 292.00 NOTE
r-patched-linux-x86_64 1.0 4.35 87.04 91.39 NOTE
r-patched-solaris-x86 1.0 192.40 NOTE
r-release-linux-x86_64 1.0 4.29 86.77 91.06 NOTE
r-release-windows-ix86+x86_64 1.0 13.00 251.00 264.00 NOTE
r-release-osx-x86_64 1.0 NOTE
r-oldrel-windows-ix86+x86_64 1.0 11.00 269.00 280.00 NOTE
r-oldrel-osx-x86_64 1.0 NOTE

Check Details

Version: 1.0
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: ‘survival’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     predict.uniCox print.uniCoxCVFit print.uniCoxFit
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0
Check: R code for possible problems
Result: NOTE
    permute.rows: no visible global function definition for ‘runif’
    uniCox: no visible global function definition for ‘quantile’
    uniCoxCV: no visible global function definition for ‘quantile’
    uniCoxCV: no visible global function definition for ‘coxph’
    uniCoxCV: no visible binding for global variable ‘var’
    Undefined global functions or variables:
     coxph quantile runif var
    Consider adding
     importFrom("stats", "quantile", "runif", "var")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'predict.uniCox':
     ‘predict.uniCox’
    
    S3 methods shown with full name in documentation object 'uniCox-internal':
     ‘print.uniCoxCVFit’ ‘print.uniCoxFit’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0
Check: compiled code
Result: NOTE
    File ‘uniCox/libs/uniCox.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc