CRAN Package Check Results for Package diem

Last updated on 2020-02-15 22:50:41 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 29.37 129.20 158.57 OK
r-devel-linux-x86_64-debian-gcc 1.0 20.57 95.52 116.09 OK
r-devel-linux-x86_64-fedora-clang 1.0 205.36 OK
r-devel-linux-x86_64-fedora-gcc 1.0 197.75 OK
r-devel-windows-ix86+x86_64 1.0 64.00 195.00 259.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.0 88.00 254.00 342.00 OK
r-patched-linux-x86_64 1.0 24.31 112.20 136.51 OK
r-patched-solaris-x86 1.0 222.60 ERROR
r-release-linux-x86_64 1.0 21.84 111.86 133.70 OK
r-release-windows-ix86+x86_64 1.0 57.00 178.00 235.00 OK
r-release-osx-x86_64 1.0 OK
r-oldrel-windows-ix86+x86_64 1.0 51.00 168.00 219.00 OK
r-oldrel-osx-x86_64 1.0 OK

Check Details

Version: 1.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘Seurat’
Flavor: r-patched-solaris-x86

Version: 1.0
Check: Rd cross-references
Result: NOTE
    Package unavailable to check Rd xrefs: ‘Seurat’
Flavor: r-patched-solaris-x86

Version: 1.0
Check: examples
Result: ERROR
    Running examples in ‘diem-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: convert_to_seurat
    > ### Title: Convert an SCE object to Seurat
    > ### Aliases: convert_to_seurat
    >
    > ### ** Examples
    >
    > mm_seur <- convert_to_seurat(x = mb_small,
    + targets = FALSE,
    + min.features = 500,
    + min.cells = 3,
    + project = mb_small@name)
    Error: Package "Seurat" needed for convert_to_seurat. Please install.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘diem.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 305-311 (diem.Rmd)
    Error: processing vignette 'diem.Rmd' failed with diagnostics:
    Package "Seurat" needed for convert_to_seurat. Please install.
    --- failed re-building ‘diem.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘diem.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86