Last updated on 2020-03-07 11:48:28 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.4.1 | 8.69 | 155.48 | 164.17 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.4.1 | 7.79 | 113.08 | 120.87 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.4.1 | 194.74 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.4.1 | 188.66 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 1.4.1 | 21.00 | 170.00 | 191.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.4.1 | 17.00 | 193.00 | 210.00 | OK | |
| r-patched-linux-x86_64 | 1.4.1 | 9.16 | 147.75 | 156.91 | OK | |
| r-patched-solaris-x86 | 1.4.1 | 271.00 | NOTE | |||
| r-release-linux-x86_64 | 1.4.1 | 8.60 | 148.40 | 157.00 | OK | |
| r-release-windows-ix86+x86_64 | 1.4.1 | 15.00 | 164.00 | 179.00 | OK | |
| r-release-osx-x86_64 | 1.4.1 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.4.1 | 10.00 | 151.00 | 161.00 | OK | |
| r-oldrel-osx-x86_64 | 1.4.1 | OK |
Version: 1.4.1
Check: examples
Result: ERROR
Running examples in 'roahd-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BD_relative
> ### Title: Relative Band Depth of functions in a univariate functional
> ### dataset
> ### Aliases: BD_relative BD_relative.fData BD_relative.default
>
> ### ** Examples
>
>
> grid = seq( 0, 1, length.out = 1e2 )
>
> Data_ref = matrix( c( 0 + sin( 2 * pi * grid ),
+ 1 + sin( 2 * pi * grid ),
+ -1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> Data_test_1 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = 1, ncol = length( grid ), byrow = TRUE )
>
> Data_test_2 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = length( grid ), ncol = 1, byrow = TRUE )
>
> Data_test_3 = 0.6 + sin( 2 * pi * grid )
>
> Data_test_4 = array( 0.6 + sin( 2 * pi * grid ), dim = length( grid ) )
>
> Data_test_5 = array( 0.6 + sin( 2 * pi * grid ), dim = c( 1, length( grid ) ) )
>
> Data_test_6 = array( 0.6 + sin( 2 * pi * grid ), dim = c( length( grid ), 1 ) )
>
> Data_test_7 = matrix( c( 0.5 + sin( 2 * pi * grid ),
+ -0.5 + sin( 2 * pi * grid ),
+ 1.1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> fD_ref = fData( grid, Data_ref )
> fD_test_1 = fData( grid, Data_test_1 )
> fD_test_2 = fData( grid, Data_test_2 )
> fD_test_3 = fData( grid, Data_test_3 )
> fD_test_4 = fData( grid, Data_test_4 )
> fD_test_5 = fData( grid, Data_test_5 )
> fD_test_6 = fData( grid, Data_test_6 )
> fD_test_7 = fData( grid, Data_test_7 )
>
> BD_relative( fD_test_1, fD_ref )
[1] 0.6666667
> BD_relative( Data_test_1, Data_ref )
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x36bc8e0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(Data_target) != class(Data_reference)) { :
the condition has length > 1
Calls: BD_relative
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.4.1
Check: tests
Result: ERROR
Running 'testthat.R' [62s/66s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(roahd)
>
> test_check("roahd")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#32: test_that("Correctness of relative BD (single test function in row matrix form)",
expect_equal(BD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 1. Error: Correctness of relative BD (single test function in row matrix form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#35: test_that("Correctness of relative BD (single test function in column matrix form)",
expect_equal(BD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 2. Error: Correctness of relative BD (single test function in column matrix f
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#38: test_that("Correctness of relative BD (single test function in vector form)",
expect_equal(BD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 3. Error: Correctness of relative BD (single test function in vector form) -
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#41: test_that("Correctness of relative BD (single test function in 1D array form)",
expect_equal(BD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 4. Error: Correctness of relative BD (single test function in 1D array form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#44: test_that("Correctness of relative BD (single test function in row-like 2D array form)",
expect_equal(BD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 5. Error: Correctness of relative BD (single test function in row-like 2D arr
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#47: test_that("Correctness of relative BD (single test function in column-like 2D array form)",
expect_equal(BD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 6. Error: Correctness of relative BD (single test function in column-like 2D
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#50: test_that("Correctness of relative BD (multiple test function)",
expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 7. Error: Correctness of relative BD (multiple test function) --------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::BD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#31: test_that("Correctness of relative MBD (single test function in row matrix form)",
expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 8. Error: Correctness of relative MBD (single test function in row matrix for
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#34: test_that("Correctness of relative MBD (single test function in column matrix form)",
expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 9. Error: Correctness of relative MBD (single test function in column matrix
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#37: test_that("Correctness of relative MBD (single test function in vector form)",
expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 10. Error: Correctness of relative MBD (single test function in vector form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#40: test_that("Correctness of relative MBD (single test function in 1D array form)",
expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 11. Error: Correctness of relative MBD (single test function in 1D array form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#43: test_that("Correctness of relative MBD (single test function in row-like 2D array form)",
expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 12. Error: Correctness of relative MBD (single test function in row-like 2D a
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#46: test_that("Correctness of relative MBD (single test function in column-like 2D array form)",
expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 13. Error: Correctness of relative MBD (single test function in column-like 2
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#49: test_that("Correctness of relative MBD (multiple test function)",
expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3,
2/3, 0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 14. Error: Correctness of relative MBD (multiple test function) ------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::MBD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_1, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#104: test_that("Area ordering - case 1", expect_equal(area_ordered(fD_1,
fD_2), c(TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x22aff88>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 15. Error: Area ordering - case 1 ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
4. roahd::area_ordered(fD_1, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_1)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#108: test_that("Area ordering - case 2", expect_equal(area_ordered(fD_2,
fD_1), c(FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x22aff88>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 16. Error: Area ordering - case 2 ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
4. roahd::area_ordered(fD_2, fD_1)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_3)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_3), c(FALSE, TRUE, FALSE,
TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#118: test_that("Area ordering - case 5", expect_equal(area_ordered(fD_2,
fD_3), c(FALSE, TRUE, FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x22aff88>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 17. Error: Area ordering - case 5 ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_2, fD_3)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_3, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_3, fD_2), c(TRUE, FALSE, TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#122: test_that("Area ordering - case 6", expect_equal(area_ordered(fD_3,
fD_2), c(TRUE, FALSE, TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x22aff88>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 18. Error: Area ordering - case 6 ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_3, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`+.fData`(fD, array(1, dim = c(1, 10)))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
--- R stacktrace ---
where 1: `+.fData`(fD, array(1, dim = c(1, 10)))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + array(1, dim = c(1, 10)))$values - matrix(seq(2,
11), nrow = 21, ncol = 10, byrow = TRUE)), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#132: test_that("Sum of fData and array", expect_equal(sum((fD + array(1,
dim = c(1, 10)))$values - matrix(seq(2, 11), nrow = 21, ncol = 10,
byrow = TRUE)), 0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
return(fD)
}
<bytecode: 0x3023bb8>
<environment: namespace:roahd>
--- function search by body ---
Function +.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 19. Error: Sum of fData and array ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`+.fData`(fD, array(1, dim = c(1, 10)))
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + fD - matrix(2 * seq(1, 10), nrow = 21,
ncol = 10, byrow = TRUE))$values), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#142: test_that("Sum of two compliant fData objects", expect_equal(sum((fD +
fD - matrix(2 * seq(1, 10), nrow = 21, ncol = 10, byrow = TRUE))$values),
0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x22aff88>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 20. Error: Sum of two compliant fData objects ------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`-.fData`(...)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(BD_relative(fD_target, fD_reference), BD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#74: test_that("Restyling test on BD ", expect_identical(BD_relative(fD_target,
fD_reference), BD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x28bf110>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 21. Error: Restyling test on BD -------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::BD_relative(Data_target, Data_reference)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(MBD_relative(fD_target, fD_reference), MBD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#77: test_that("Restyling test on MBD ", expect_identical(MBD_relative(fD_target,
fD_reference), MBD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x31f99a8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
-- 22. Error: Restyling test on MBD ------------------------------------------
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::MBD_relative(Data_target, Data_reference)
== testthat results ===========================================================
[ OK: 130 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 22 ]
1. Error: Correctness of relative BD (single test function in row matrix form)
2. Error: Correctness of relative BD (single test function in column matrix form)
3. Error: Correctness of relative BD (single test function in vector form)
4. Error: Correctness of relative BD (single test function in 1D array form)
5. Error: Correctness of relative BD (single test function in row-like 2D array form)
6. Error: Correctness of relative BD (single test function in column-like 2D array form)
7. Error: Correctness of relative BD (multiple test function)
8. Error: Correctness of relative MBD (single test function in row matrix form)
9. Error: Correctness of relative MBD (single test function in column matrix form)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.4.1
Check: examples
Result: ERROR
Running examples in ‘roahd-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: BD_relative
> ### Title: Relative Band Depth of functions in a univariate functional
> ### dataset
> ### Aliases: BD_relative BD_relative.fData BD_relative.default
>
> ### ** Examples
>
>
> grid = seq( 0, 1, length.out = 1e2 )
>
> Data_ref = matrix( c( 0 + sin( 2 * pi * grid ),
+ 1 + sin( 2 * pi * grid ),
+ -1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> Data_test_1 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = 1, ncol = length( grid ), byrow = TRUE )
>
> Data_test_2 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = length( grid ), ncol = 1, byrow = TRUE )
>
> Data_test_3 = 0.6 + sin( 2 * pi * grid )
>
> Data_test_4 = array( 0.6 + sin( 2 * pi * grid ), dim = length( grid ) )
>
> Data_test_5 = array( 0.6 + sin( 2 * pi * grid ), dim = c( 1, length( grid ) ) )
>
> Data_test_6 = array( 0.6 + sin( 2 * pi * grid ), dim = c( length( grid ), 1 ) )
>
> Data_test_7 = matrix( c( 0.5 + sin( 2 * pi * grid ),
+ -0.5 + sin( 2 * pi * grid ),
+ 1.1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> fD_ref = fData( grid, Data_ref )
> fD_test_1 = fData( grid, Data_test_1 )
> fD_test_2 = fData( grid, Data_test_2 )
> fD_test_3 = fData( grid, Data_test_3 )
> fD_test_4 = fData( grid, Data_test_4 )
> fD_test_5 = fData( grid, Data_test_5 )
> fD_test_6 = fData( grid, Data_test_6 )
> fD_test_7 = fData( grid, Data_test_7 )
>
> BD_relative( fD_test_1, fD_ref )
[1] 0.6666667
> BD_relative( Data_test_1, Data_ref )
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x55d037272d18>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(Data_target) != class(Data_reference)) { :
the condition has length > 1
Calls: BD_relative
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [44s/64s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(roahd)
>
> test_check("roahd")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#32: test_that("Correctness of relative BD (single test function in row matrix form)",
expect_equal(BD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 1. Error: Correctness of relative BD (single test function in row matrix form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#35: test_that("Correctness of relative BD (single test function in column matrix form)",
expect_equal(BD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 2. Error: Correctness of relative BD (single test function in column matrix f
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#38: test_that("Correctness of relative BD (single test function in vector form)",
expect_equal(BD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 3. Error: Correctness of relative BD (single test function in vector form) ─
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#41: test_that("Correctness of relative BD (single test function in 1D array form)",
expect_equal(BD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 4. Error: Correctness of relative BD (single test function in 1D array form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#44: test_that("Correctness of relative BD (single test function in row-like 2D array form)",
expect_equal(BD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 5. Error: Correctness of relative BD (single test function in row-like 2D arr
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#47: test_that("Correctness of relative BD (single test function in column-like 2D array form)",
expect_equal(BD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 6. Error: Correctness of relative BD (single test function in column-like 2D
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#50: test_that("Correctness of relative BD (multiple test function)",
expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 7. Error: Correctness of relative BD (multiple test function) ──────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::BD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#31: test_that("Correctness of relative MBD (single test function in row matrix form)",
expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 8. Error: Correctness of relative MBD (single test function in row matrix for
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#34: test_that("Correctness of relative MBD (single test function in column matrix form)",
expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 9. Error: Correctness of relative MBD (single test function in column matrix
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#37: test_that("Correctness of relative MBD (single test function in vector form)",
expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 10. Error: Correctness of relative MBD (single test function in vector form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#40: test_that("Correctness of relative MBD (single test function in 1D array form)",
expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 11. Error: Correctness of relative MBD (single test function in 1D array form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#43: test_that("Correctness of relative MBD (single test function in row-like 2D array form)",
expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 12. Error: Correctness of relative MBD (single test function in row-like 2D a
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#46: test_that("Correctness of relative MBD (single test function in column-like 2D array form)",
expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 13. Error: Correctness of relative MBD (single test function in column-like 2
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#49: test_that("Correctness of relative MBD (multiple test function)",
expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3,
2/3, 0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 14. Error: Correctness of relative MBD (multiple test function) ────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::MBD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_1, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#104: test_that("Area ordering - case 1", expect_equal(area_ordered(fD_1,
fD_2), c(TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x5602569fdd28>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 15. Error: Area ordering - case 1 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
4. roahd::area_ordered(fD_1, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_1)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#108: test_that("Area ordering - case 2", expect_equal(area_ordered(fD_2,
fD_1), c(FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x5602569fdd28>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 16. Error: Area ordering - case 2 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
4. roahd::area_ordered(fD_2, fD_1)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_3)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_3), c(FALSE, TRUE, FALSE,
TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#118: test_that("Area ordering - case 5", expect_equal(area_ordered(fD_2,
fD_3), c(FALSE, TRUE, FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x5602569fdd28>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 17. Error: Area ordering - case 5 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_2, fD_3)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_3, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_3, fD_2), c(TRUE, FALSE, TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#122: test_that("Area ordering - case 6", expect_equal(area_ordered(fD_3,
fD_2), c(TRUE, FALSE, TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x5602569fdd28>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 18. Error: Area ordering - case 6 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_3, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`+.fData`(fD, array(1, dim = c(1, 10)))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
--- R stacktrace ---
where 1: `+.fData`(fD, array(1, dim = c(1, 10)))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + array(1, dim = c(1, 10)))$values - matrix(seq(2,
11), nrow = 21, ncol = 10, byrow = TRUE)), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#132: test_that("Sum of fData and array", expect_equal(sum((fD + array(1,
dim = c(1, 10)))$values - matrix(seq(2, 11), nrow = 21, ncol = 10,
byrow = TRUE)), 0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
return(fD)
}
<bytecode: 0x56025629a7a0>
<environment: namespace:roahd>
--- function search by body ---
Function +.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 19. Error: Sum of fData and array ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`+.fData`(fD, array(1, dim = c(1, 10)))
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + fD - matrix(2 * seq(1, 10), nrow = 21,
ncol = 10, byrow = TRUE))$values), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#142: test_that("Sum of two compliant fData objects", expect_equal(sum((fD +
fD - matrix(2 * seq(1, 10), nrow = 21, ncol = 10, byrow = TRUE))$values),
0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x5602569fdd28>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 20. Error: Sum of two compliant fData objects ──────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`-.fData`(...)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(BD_relative(fD_target, fD_reference), BD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#74: test_that("Restyling test on BD ", expect_identical(BD_relative(fD_target,
fD_reference), BD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x560256666f08>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 21. Error: Restyling test on BD ───────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::BD_relative(Data_target, Data_reference)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(MBD_relative(fD_target, fD_reference), MBD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#77: test_that("Restyling test on MBD ", expect_identical(MBD_relative(fD_target,
fD_reference), MBD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x560255f7c4a0>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 22. Error: Restyling test on MBD ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::MBD_relative(Data_target, Data_reference)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 130 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 22 ]
1. Error: Correctness of relative BD (single test function in row matrix form)
2. Error: Correctness of relative BD (single test function in column matrix form)
3. Error: Correctness of relative BD (single test function in vector form)
4. Error: Correctness of relative BD (single test function in 1D array form)
5. Error: Correctness of relative BD (single test function in row-like 2D array form)
6. Error: Correctness of relative BD (single test function in column-like 2D array form)
7. Error: Correctness of relative BD (multiple test function)
8. Error: Correctness of relative MBD (single test function in row matrix form)
9. Error: Correctness of relative MBD (single test function in column matrix form)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.4.1
Check: examples
Result: ERROR
Running examples in ‘roahd-Ex.R’ failed
The error most likely occurred in:
> ### Name: BD_relative
> ### Title: Relative Band Depth of functions in a univariate functional
> ### dataset
> ### Aliases: BD_relative BD_relative.fData BD_relative.default
>
> ### ** Examples
>
>
> grid = seq( 0, 1, length.out = 1e2 )
>
> Data_ref = matrix( c( 0 + sin( 2 * pi * grid ),
+ 1 + sin( 2 * pi * grid ),
+ -1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> Data_test_1 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = 1, ncol = length( grid ), byrow = TRUE )
>
> Data_test_2 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = length( grid ), ncol = 1, byrow = TRUE )
>
> Data_test_3 = 0.6 + sin( 2 * pi * grid )
>
> Data_test_4 = array( 0.6 + sin( 2 * pi * grid ), dim = length( grid ) )
>
> Data_test_5 = array( 0.6 + sin( 2 * pi * grid ), dim = c( 1, length( grid ) ) )
>
> Data_test_6 = array( 0.6 + sin( 2 * pi * grid ), dim = c( length( grid ), 1 ) )
>
> Data_test_7 = matrix( c( 0.5 + sin( 2 * pi * grid ),
+ -0.5 + sin( 2 * pi * grid ),
+ 1.1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> fD_ref = fData( grid, Data_ref )
> fD_test_1 = fData( grid, Data_test_1 )
> fD_test_2 = fData( grid, Data_test_2 )
> fD_test_3 = fData( grid, Data_test_3 )
> fD_test_4 = fData( grid, Data_test_4 )
> fD_test_5 = fData( grid, Data_test_5 )
> fD_test_6 = fData( grid, Data_test_6 )
> fD_test_7 = fData( grid, Data_test_7 )
>
> BD_relative( fD_test_1, fD_ref )
[1] 0.6666667
> BD_relative( Data_test_1, Data_ref )
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x399a5d0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(Data_target) != class(Data_reference)) { :
the condition has length > 1
Calls: BD_relative
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.4.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [73s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(roahd)
>
> test_check("roahd")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#32: test_that("Correctness of relative BD (single test function in row matrix form)",
expect_equal(BD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 1. Error: Correctness of relative BD (single test function in row matrix form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#35: test_that("Correctness of relative BD (single test function in column matrix form)",
expect_equal(BD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 2. Error: Correctness of relative BD (single test function in column matrix f
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#38: test_that("Correctness of relative BD (single test function in vector form)",
expect_equal(BD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 3. Error: Correctness of relative BD (single test function in vector form) ─
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#41: test_that("Correctness of relative BD (single test function in 1D array form)",
expect_equal(BD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 4. Error: Correctness of relative BD (single test function in 1D array form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#44: test_that("Correctness of relative BD (single test function in row-like 2D array form)",
expect_equal(BD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 5. Error: Correctness of relative BD (single test function in row-like 2D arr
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#47: test_that("Correctness of relative BD (single test function in column-like 2D array form)",
expect_equal(BD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 6. Error: Correctness of relative BD (single test function in column-like 2D
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#50: test_that("Correctness of relative BD (multiple test function)",
expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 7. Error: Correctness of relative BD (multiple test function) ──────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::BD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#31: test_that("Correctness of relative MBD (single test function in row matrix form)",
expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 8. Error: Correctness of relative MBD (single test function in row matrix for
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#34: test_that("Correctness of relative MBD (single test function in column matrix form)",
expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 9. Error: Correctness of relative MBD (single test function in column matrix
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#37: test_that("Correctness of relative MBD (single test function in vector form)",
expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 10. Error: Correctness of relative MBD (single test function in vector form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#40: test_that("Correctness of relative MBD (single test function in 1D array form)",
expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 11. Error: Correctness of relative MBD (single test function in 1D array form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#43: test_that("Correctness of relative MBD (single test function in row-like 2D array form)",
expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 12. Error: Correctness of relative MBD (single test function in row-like 2D a
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#46: test_that("Correctness of relative MBD (single test function in column-like 2D array form)",
expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 13. Error: Correctness of relative MBD (single test function in column-like 2
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#49: test_that("Correctness of relative MBD (multiple test function)",
expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3,
2/3, 0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 14. Error: Correctness of relative MBD (multiple test function) ────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::MBD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_1, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#104: test_that("Area ordering - case 1", expect_equal(area_ordered(fD_1,
fD_2), c(TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x37bc2d0>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 15. Error: Area ordering - case 1 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
4. roahd::area_ordered(fD_1, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_1)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#108: test_that("Area ordering - case 2", expect_equal(area_ordered(fD_2,
fD_1), c(FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x37bc2d0>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 16. Error: Area ordering - case 2 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
4. roahd::area_ordered(fD_2, fD_1)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_3)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_3), c(FALSE, TRUE, FALSE,
TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#118: test_that("Area ordering - case 5", expect_equal(area_ordered(fD_2,
fD_3), c(FALSE, TRUE, FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x37bc2d0>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 17. Error: Area ordering - case 5 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_2, fD_3)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_3, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_3, fD_2), c(TRUE, FALSE, TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#122: test_that("Area ordering - case 6", expect_equal(area_ordered(fD_3,
fD_2), c(TRUE, FALSE, TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x37bc2d0>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 18. Error: Area ordering - case 6 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_3, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`+.fData`(fD, array(1, dim = c(1, 10)))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
--- R stacktrace ---
where 1: `+.fData`(fD, array(1, dim = c(1, 10)))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + array(1, dim = c(1, 10)))$values - matrix(seq(2,
11), nrow = 21, ncol = 10, byrow = TRUE)), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#132: test_that("Sum of fData and array", expect_equal(sum((fD + array(1,
dim = c(1, 10)))$values - matrix(seq(2, 11), nrow = 21, ncol = 10,
byrow = TRUE)), 0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
return(fD)
}
<bytecode: 0x3773820>
<environment: namespace:roahd>
--- function search by body ---
Function +.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 19. Error: Sum of fData and array ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`+.fData`(fD, array(1, dim = c(1, 10)))
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + fD - matrix(2 * seq(1, 10), nrow = 21,
ncol = 10, byrow = TRUE))$values), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#142: test_that("Sum of two compliant fData objects", expect_equal(sum((fD +
fD - matrix(2 * seq(1, 10), nrow = 21, ncol = 10, byrow = TRUE))$values),
0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x37bc2d0>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 20. Error: Sum of two compliant fData objects ──────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`-.fData`(...)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(BD_relative(fD_target, fD_reference), BD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#74: test_that("Restyling test on BD ", expect_identical(BD_relative(fD_target,
fD_reference), BD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x23d2dd0>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 21. Error: Restyling test on BD ───────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::BD_relative(Data_target, Data_reference)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(MBD_relative(fD_target, fD_reference), MBD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#77: test_that("Restyling test on MBD ", expect_identical(MBD_relative(fD_target,
fD_reference), MBD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x28cb5c8>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 22. Error: Restyling test on MBD ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::MBD_relative(Data_target, Data_reference)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 130 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 22 ]
1. Error: Correctness of relative BD (single test function in row matrix form)
2. Error: Correctness of relative BD (single test function in column matrix form)
3. Error: Correctness of relative BD (single test function in vector form)
4. Error: Correctness of relative BD (single test function in 1D array form)
5. Error: Correctness of relative BD (single test function in row-like 2D array form)
6. Error: Correctness of relative BD (single test function in column-like 2D array form)
7. Error: Correctness of relative BD (multiple test function)
8. Error: Correctness of relative MBD (single test function in row matrix form)
9. Error: Correctness of relative MBD (single test function in column matrix form)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.4.1
Check: examples
Result: ERROR
Running examples in ‘roahd-Ex.R’ failed
The error most likely occurred in:
> ### Name: BD_relative
> ### Title: Relative Band Depth of functions in a univariate functional
> ### dataset
> ### Aliases: BD_relative BD_relative.fData BD_relative.default
>
> ### ** Examples
>
>
> grid = seq( 0, 1, length.out = 1e2 )
>
> Data_ref = matrix( c( 0 + sin( 2 * pi * grid ),
+ 1 + sin( 2 * pi * grid ),
+ -1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> Data_test_1 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = 1, ncol = length( grid ), byrow = TRUE )
>
> Data_test_2 = matrix( c( 0.6 + sin( 2 * pi * grid ) ),
+ nrow = length( grid ), ncol = 1, byrow = TRUE )
>
> Data_test_3 = 0.6 + sin( 2 * pi * grid )
>
> Data_test_4 = array( 0.6 + sin( 2 * pi * grid ), dim = length( grid ) )
>
> Data_test_5 = array( 0.6 + sin( 2 * pi * grid ), dim = c( 1, length( grid ) ) )
>
> Data_test_6 = array( 0.6 + sin( 2 * pi * grid ), dim = c( length( grid ), 1 ) )
>
> Data_test_7 = matrix( c( 0.5 + sin( 2 * pi * grid ),
+ -0.5 + sin( 2 * pi * grid ),
+ 1.1 + sin( 2 * pi * grid ) ),
+ nrow = 3, ncol = length( grid ), byrow = TRUE )
>
> fD_ref = fData( grid, Data_ref )
> fD_test_1 = fData( grid, Data_test_1 )
> fD_test_2 = fData( grid, Data_test_2 )
> fD_test_3 = fData( grid, Data_test_3 )
> fD_test_4 = fData( grid, Data_test_4 )
> fD_test_5 = fData( grid, Data_test_5 )
> fD_test_6 = fData( grid, Data_test_6 )
> fD_test_7 = fData( grid, Data_test_7 )
>
> BD_relative( fD_test_1, fD_ref )
[1] 0.6666667
> BD_relative( Data_test_1, Data_ref )
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x3bab258>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(Data_target) != class(Data_reference)) { :
the condition has length > 1
Calls: BD_relative
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.4.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [66s/75s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(roahd)
>
> test_check("roahd")
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#32: test_that("Correctness of relative BD (single test function in row matrix form)",
expect_equal(BD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 1. Error: Correctness of relative BD (single test function in row matrix form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#35: test_that("Correctness of relative BD (single test function in column matrix form)",
expect_equal(BD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 2. Error: Correctness of relative BD (single test function in column matrix f
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#38: test_that("Correctness of relative BD (single test function in vector form)",
expect_equal(BD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 3. Error: Correctness of relative BD (single test function in vector form) ─
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#41: test_that("Correctness of relative BD (single test function in 1D array form)",
expect_equal(BD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 4. Error: Correctness of relative BD (single test function in 1D array form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#44: test_that("Correctness of relative BD (single test function in row-like 2D array form)",
expect_equal(BD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 5. Error: Correctness of relative BD (single test function in row-like 2D arr
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#47: test_that("Correctness of relative BD (single test function in column-like 2D array form)",
expect_equal(BD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 6. Error: Correctness of relative BD (single test function in column-like 2D
the condition has length > 1
Backtrace:
1. testthat::expect_equal(BD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::BD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_BD_relative.R#50: test_that("Correctness of relative BD (multiple test function)",
expect_equal(BD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 7. Error: Correctness of relative BD (multiple test function) ──────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::BD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_1, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_1, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#31: test_that("Correctness of relative MBD (single test function in row matrix form)",
expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 8. Error: Correctness of relative MBD (single test function in row matrix for
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_1, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_1, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_2, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_2, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#34: test_that("Correctness of relative MBD (single test function in column matrix form)",
expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 9. Error: Correctness of relative MBD (single test function in column matrix
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_2, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_2, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_3, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_3, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#37: test_that("Correctness of relative MBD (single test function in vector form)",
expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE TRUE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 10. Error: Correctness of relative MBD (single test function in vector form)
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_3, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_3, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_4, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_4, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#40: test_that("Correctness of relative MBD (single test function in 1D array form)",
expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] TRUE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 11. Error: Correctness of relative MBD (single test function in 1D array form
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_4, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_4, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_5, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_5, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#43: test_that("Correctness of relative MBD (single test function in row-like 2D array form)",
expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 12. Error: Correctness of relative MBD (single test function in row-like 2D a
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_5, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_5, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_6, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_6, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#46: test_that("Correctness of relative MBD (single test function in column-like 2D array form)",
expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 13. Error: Correctness of relative MBD (single test function in column-like 2
the condition has length > 1
Backtrace:
1. testthat::expect_equal(MBD_relative(Data_test_6, Data_ref), 2/3)
4. roahd::MBD_relative(Data_test_6, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_test_7, Data_ref)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_test_7, Data_ref)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3, 2/3,
0))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_MBD_relative.R#49: test_that("Correctness of relative MBD (multiple test function)",
expect_equal(MBD_relative(Data_test_7, Data_ref), c(2/3,
2/3, 0)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 14. Error: Correctness of relative MBD (multiple test function) ────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::MBD_relative(Data_test_7, Data_ref)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_1, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#104: test_that("Area ordering - case 1", expect_equal(area_ordered(fD_1,
fD_2), c(TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x1c50ab8>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 15. Error: Area ordering - case 1 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_1, fD_2), c(TRUE, FALSE))
4. roahd::area_ordered(fD_1, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_1)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#108: test_that("Area ordering - case 2", expect_equal(area_ordered(fD_2,
fD_1), c(FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x1c50ab8>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 16. Error: Area ordering - case 2 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(area_ordered(fD_2, fD_1), c(FALSE, TRUE))
4. roahd::area_ordered(fD_2, fD_1)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(gData, fData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(gData, fData$values)
where 2: area_under_curve(gData - fData$values)
where 3: area_ordered(fD_2, fD_3)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_2, fD_3), c(FALSE, TRUE, FALSE,
TRUE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#118: test_that("Area ordering - case 5", expect_equal(area_ordered(fD_2,
fD_3), c(FALSE, TRUE, FALSE, TRUE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x1c50ab8>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 17. Error: Area ordering - case 5 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_2, fD_3)
6. roahd:::`-.fData`(gData, fData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fData, gData$values)
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fData, gData$values)
where 2: area_under_curve(fData - gData$values)
where 3: area_ordered(fD_3, fD_2)
where 4: eval_bare(expr, quo_get_env(quo))
where 5: quasi_label(enquo(object), label, arg = "object")
where 6: expect_equal(area_ordered(fD_3, fD_2), c(TRUE, FALSE, TRUE, FALSE))
where 7: eval(code, test_env)
where 8: eval(code, test_env)
where 9: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 10: doTryCatch(return(expr), name, parentenv, handler)
where 11: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 12: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 13: doTryCatch(return(expr), name, parentenv, handler)
where 14: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 15: tryCatchList(expr, classes, parentenv, handlers)
where 16: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 17: test_code(desc, code, env = parent.frame())
where 18 at testthat/test_correlation.R#122: test_that("Area ordering - case 6", expect_equal(area_ordered(fD_3,
fD_2), c(TRUE, FALSE, TRUE, FALSE)))
where 19: eval(code, test_env)
where 20: eval(code, test_env)
where 21: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 22: doTryCatch(return(expr), name, parentenv, handler)
where 23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 24: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 25: doTryCatch(return(expr), name, parentenv, handler)
where 26: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 27: tryCatchList(expr, classes, parentenv, handlers)
where 28: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 29: test_code(NULL, exprs, env)
where 30: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 31: force(code)
where 32: doWithOneRestart(return(expr), restart)
where 33: withOneRestart(expr, restarts[[1L]])
where 34: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 35: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 36: FUN(X[[i]], ...)
where 37: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 38: force(code)
where 39: doWithOneRestart(return(expr), restart)
where 40: withOneRestart(expr, restarts[[1L]])
where 41: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 42: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 43: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 45: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 46: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x1c50ab8>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 18. Error: Area ordering - case 6 ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd::area_ordered(fD_3, fD_2)
6. roahd:::`-.fData`(fData, gData$values)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`+.fData`(fD, array(1, dim = c(1, 10)))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
--- R stacktrace ---
where 1: `+.fData`(fD, array(1, dim = c(1, 10)))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + array(1, dim = c(1, 10)))$values - matrix(seq(2,
11), nrow = 21, ncol = 10, byrow = TRUE)), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#132: test_that("Sum of fData and array", expect_equal(sum((fD + array(1,
dim = c(1, 10)))$values - matrix(seq(2, 11), nrow = 21, ncol = 10,
byrow = TRUE)), 0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in +.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) + as.vector(A$values))
}
else {
fD$values = fD$values + A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = t(t(fD$values) + as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in +.fData: mismatching arguments")
}
fD$values = fD$values + A
}
return(fD)
}
<bytecode: 0x1f68488>
<environment: namespace:roahd>
--- function search by body ---
Function +.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 19. Error: Sum of fData and array ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`+.fData`(fD, array(1, dim = c(1, 10)))
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
`-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
--- call from argument ---
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h || fD$P !=
A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
} else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
} else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
--- R stacktrace ---
where 1: `-.fData`(fD + fD, matrix(2 * seq(1, 10), nrow = 21, ncol = 10,
byrow = TRUE))
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(object), label, arg = "object")
where 4: expect_equal(sum((fD + fD - matrix(2 * seq(1, 10), nrow = 21,
ncol = 10, byrow = TRUE))$values), 0)
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_fData.R#142: test_that("Sum of two compliant fData objects", expect_equal(sum((fD +
fD - matrix(2 * seq(1, 10), nrow = 21, ncol = 10, byrow = TRUE))$values),
0))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (fD, A)
{
if (class(A) == "fData") {
if (fD$t0 != A$t0 || fD$tP != A$tP || fD$h != A$h ||
fD$P != A$P) {
stop("Error in -.fData: functional data defined over\n mismatching intervals")
}
if (A$N == 1) {
fD$values = t(t(fD$values) - as.vector(A$values))
}
else {
fD$values = fD$values - A$values
}
}
else if (is.null(dim(A)) || nrow(A) == 1) {
A = as.vector(A)
if (length(A) != fD$P) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = t(t(fD$values) - as.vector(rep(A, fD$P/length(A))))
}
else if (is.matrix(A)) {
if (ncol(A) != fD$P || nrow(A) != fD$N) {
stop("Error in -.fData: mismatching arguments")
}
fD$values = fD$values - A
}
return(fD)
}
<bytecode: 0x1c50ab8>
<environment: namespace:roahd>
--- function search by body ---
Function -.fData in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 20. Error: Sum of two compliant fData objects ──────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_equal(...)
4. roahd:::`-.fData`(...)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
BD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: BD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(BD_relative(fD_target, fD_reference), BD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#74: test_that("Restyling test on BD ", expect_identical(BD_relative(fD_target,
fD_reference), BD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in BD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("BD_relative", Data_target)
}
<bytecode: 0x2334a60>
<environment: namespace:roahd>
--- function search by body ---
Function BD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 21. Error: Restyling test on BD ───────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::BD_relative(Data_target, Data_reference)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
roahd
--- call from context ---
MBD_relative(Data_target, Data_reference)
--- call from argument ---
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array", "matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
--- R stacktrace ---
where 1: MBD_relative(Data_target, Data_reference)
where 2: eval_bare(expr, quo_get_env(quo))
where 3: quasi_label(enquo(expected), expected.label, arg = "expected")
where 4: expect_identical(MBD_relative(fD_target, fD_reference), MBD_relative(Data_target,
Data_reference))
where 5: eval(code, test_env)
where 6: eval(code, test_env)
where 7: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 8: doTryCatch(return(expr), name, parentenv, handler)
where 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 10: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 11: doTryCatch(return(expr), name, parentenv, handler)
where 12: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 13: tryCatchList(expr, classes, parentenv, handlers)
where 14: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 15: test_code(desc, code, env = parent.frame())
where 16 at testthat/test_restyling.R#77: test_that("Restyling test on MBD ", expect_identical(MBD_relative(fD_target,
fD_reference), MBD_relative(Data_target, Data_reference)))
where 17: eval(code, test_env)
where 18: eval(code, test_env)
where 19: withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error)
where 20: doTryCatch(return(expr), name, parentenv, handler)
where 21: tryCatchOne(expr, names, parentenv, handlers[[1L]])
where 22: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
where 23: doTryCatch(return(expr), name, parentenv, handler)
where 24: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]),
names[nh], parentenv, handlers[[nh]])
where 25: tryCatchList(expr, classes, parentenv, handlers)
where 26: tryCatch(withCallingHandlers({
eval(code, test_env)
if (!handled && !is.null(test)) {
skip_empty()
}
}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning,
message = handle_message, error = handle_error), error = handle_fatal,
skip = function(e) {
})
where 27: test_code(NULL, exprs, env)
where 28: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
where 29: force(code)
where 30: doWithOneRestart(return(expr), restart)
where 31: withOneRestart(expr, restarts[[1L]])
where 32: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 33: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter,
{
reporter$start_file(basename(path))
lister$start_file(basename(path))
source_file(path, new.env(parent = env), chdir = TRUE,
wrap = wrap)
reporter$.end_context()
reporter$end_file()
})
where 34: FUN(X[[i]], ...)
where 35: lapply(paths, test_file, env = env, reporter = current_reporter,
start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
where 36: force(code)
where 37: doWithOneRestart(return(expr), restart)
where 38: withOneRestart(expr, restarts[[1L]])
where 39: withRestarts(testthat_abort_reporter = function() NULL, force(code))
where 40: with_reporter(reporter = current_reporter, results <- lapply(paths,
test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE,
load_helpers = FALSE, wrap = wrap))
where 41: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 42: test_dir(path = test_path, reporter = reporter, env = env, filter = filter,
..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
wrap = wrap)
where 43: test_package_dir(package = package, test_path = test_path, filter = filter,
reporter = reporter, ..., stop_on_failure = stop_on_failure,
stop_on_warning = stop_on_warning, wrap = wrap)
where 44: test_check("roahd")
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (Data_target, Data_reference)
{
if (class(Data_target) != class(Data_reference)) {
if (!(class(Data_target) %in% c("numeric", "array", "matrix") &
class(Data_reference) %in% c("numeric", "array",
"matrix"))) {
stop("Error in MBD_relative: you have to provide target and reference data\n with the same class")
}
}
UseMethod("MBD_relative", Data_target)
}
<bytecode: 0x1a2cc88>
<environment: namespace:roahd>
--- function search by body ---
Function MBD_relative in namespace roahd has this body.
----------- END OF FAILURE REPORT --------------
── 22. Error: Restyling test on MBD ──────────────────────────────────────────
the condition has length > 1
Backtrace:
1. testthat::expect_identical(...)
4. roahd::MBD_relative(Data_target, Data_reference)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 130 | SKIPPED: 2 | WARNINGS: 0 | FAILED: 22 ]
1. Error: Correctness of relative BD (single test function in row matrix form)
2. Error: Correctness of relative BD (single test function in column matrix form)
3. Error: Correctness of relative BD (single test function in vector form)
4. Error: Correctness of relative BD (single test function in 1D array form)
5. Error: Correctness of relative BD (single test function in row-like 2D array form)
6. Error: Correctness of relative BD (single test function in column-like 2D array form)
7. Error: Correctness of relative BD (multiple test function)
8. Error: Correctness of relative MBD (single test function in row matrix form)
9. Error: Correctness of relative MBD (single test function in column matrix form)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.4.1
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
data 2.9Mb
doc 1.7Mb
Flavor: r-patched-solaris-x86