CRAN Package Check Results for Package ROCt

Last updated on 2020-04-09 09:48:25 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.5 10.08 67.50 77.58 ERROR
r-devel-linux-x86_64-debian-gcc 0.9.5 7.46 52.37 59.83 ERROR
r-devel-linux-x86_64-fedora-clang 0.9.5 91.78 ERROR
r-devel-linux-x86_64-fedora-gcc 0.9.5 95.48 ERROR
r-devel-windows-ix86+x86_64 0.9.5 16.00 111.00 127.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 0.9.5 17.00 76.00 93.00 ERROR
r-patched-linux-x86_64 0.9.5 8.22 65.03 73.25 ERROR
r-patched-osx-x86_64 0.9.5 ERROR
r-patched-solaris-x86 0.9.5 139.70 ERROR
r-release-linux-x86_64 0.9.5 7.46 63.25 70.71 OK
r-release-windows-ix86+x86_64 0.9.5 15.00 103.00 118.00 OK
r-release-osx-x86_64 0.9.5 OK
r-oldrel-windows-ix86+x86_64 0.9.5 15.00 85.00 100.00 OK
r-oldrel-osx-x86_64 0.9.5 OK

Check Details

Version: 0.9.5
Check: examples
Result: ERROR
    Running examples in 'ROCt-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: EUt2
    > ### Title: Optimal Cut-Off Estimation Of A Prognostic Marker (The Two
    > ### Groups Are observed).
    > ### Aliases: EUt2
    > ### Keywords: utility
    >
    > ### ** Examples
    >
    >
    > # import and attach the data example
    >
    > data(csl)
    > csl <- csl[order(csl$id, csl$time),]
    > csl$ordre <-0
    > for (i in unique(csl$id)) {csl$ordre[csl$id==i] <- 1:sum(csl$id==i)}
    >
    > csl$ttt[csl$treat==0]<-"A"
    > csl$ttt[csl$treat==1]<-"B"
    >
    > csl0 <- csl[csl$ordre==1,]
    > csl0<-csl0[,c(1,4,5,14,9)]
    >
    > # the expected utility function for a prognostic up to 8 years
    >
    > EUt.obj <- EUt2(csl0$eventT, csl0$dc, csl0$prot.base, treatment= csl0$ttt,
    + pro.time=8, u.A0=0.75*0.95, u.A1=0, u.B0=0.75, u.B1=0)
    Warning in EUt2(csl0$eventT, csl0$dc, csl0$prot.base, treatment = csl0$ttt, :
     NAs introduced by coercion
    Warning in max(tab.res$utility, na.rm = TRUE) :
     no non-missing arguments to max; returning -Inf
    Warning in max(tab.res$utility, na.rm = TRUE) :
     no non-missing arguments to max; returning -Inf
    Warning in max(event[who2]) :
     no non-missing arguments to max; returning -Inf
    Error in rep(1:nstrat, x$strata) : invalid 'times' argument
    Calls: EUt2 -> meanALL -> summary -> summary.survfit -> survmean
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 0.9.5
Check: examples
Result: ERROR
    Running examples in ‘ROCt-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: EUt2
    > ### Title: Optimal Cut-Off Estimation Of A Prognostic Marker (The Two
    > ### Groups Are observed).
    > ### Aliases: EUt2
    > ### Keywords: utility
    >
    > ### ** Examples
    >
    >
    > # import and attach the data example
    >
    > data(csl)
    > csl <- csl[order(csl$id, csl$time),]
    > csl$ordre <-0
    > for (i in unique(csl$id)) {csl$ordre[csl$id==i] <- 1:sum(csl$id==i)}
    >
    > csl$ttt[csl$treat==0]<-"A"
    > csl$ttt[csl$treat==1]<-"B"
    >
    > csl0 <- csl[csl$ordre==1,]
    > csl0<-csl0[,c(1,4,5,14,9)]
    >
    > # the expected utility function for a prognostic up to 8 years
    >
    > EUt.obj <- EUt2(csl0$eventT, csl0$dc, csl0$prot.base, treatment= csl0$ttt,
    + pro.time=8, u.A0=0.75*0.95, u.A1=0, u.B0=0.75, u.B1=0)
    Warning in EUt2(csl0$eventT, csl0$dc, csl0$prot.base, treatment = csl0$ttt, :
     NAs introduced by coercion
    Warning in max(tab.res$utility, na.rm = TRUE) :
     no non-missing arguments to max; returning -Inf
    Warning in max(tab.res$utility, na.rm = TRUE) :
     no non-missing arguments to max; returning -Inf
    Warning in max(event[who2]) :
     no non-missing arguments to max; returning -Inf
    Error in rep(1:nstrat, x$strata) : invalid 'times' argument
    Calls: EUt2 -> meanALL -> summary -> summary.survfit -> survmean
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-osx-x86_64, r-patched-solaris-x86