CRAN Package Check Results for Package packager

Last updated on 2020-05-12 06:48:35 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.3.0 4.43 72.48 76.91 OK
r-devel-linux-x86_64-debian-gcc 1.3.0 3.93 135.46 139.39 OK
r-devel-linux-x86_64-fedora-clang 1.3.0 208.84 OK
r-devel-linux-x86_64-fedora-gcc 1.3.0 228.19 OK
r-devel-windows-ix86+x86_64 1.3.0 20.00 267.00 287.00 OK
r-patched-linux-x86_64 1.3.0 4.61 176.52 181.13 OK
r-patched-solaris-x86 1.3.0 158.20 WARN
r-release-linux-x86_64 1.3.0 4.36 0.73 5.09 FAIL
r-release-osx-x86_64 1.2.1 OK
r-release-windows-ix86+x86_64 1.2.1 19.00 353.00 372.00 OK
r-oldrel-osx-x86_64 1.3.0 OK
r-oldrel-windows-ix86+x86_64 1.3.0 9.00 257.00 266.00 OK

Check Details

Version: 1.3.0
Check: dependencies in R code
Result: NOTE
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: S3 generic/method consistency
Result: WARN
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    See section ‘Generic functions and methods’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: replacement functions
Result: WARN
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    The argument of a replacement function which corresponds to the right
    hand side must be named ‘value’.
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: foreign function calls
Result: NOTE
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    See chapter ‘System and foreign language interfaces’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: R code for possible problems
Result: NOTE
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: for missing documentation entries
Result: WARN
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    All user-level objects in a package should have documentation entries.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: for code/documentation mismatches
Result: WARN
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: Rd \usage sections
Result: NOTE
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘An_Introduction_to_packager.Rasciidoc’ using rasciidoc
    Warning in run_knit(file_name, knit = knit, envir = envir, write_to_disk = write_to_disk) :
     Setting option knit to TRUE based on the file contents!
    
    
    processing file: /home/ripley/R/packages/tests32/packager.Rcheck/vign_test/packager/vignettes/An_Introduction_to_packager.Rasciidoc
     ordinary text without R code
    
    label: unnamed-chunk-1 (with options)
    List of 2
     $ results: chr "hide"
     $ message: logi FALSE
    
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    ✔ Creating '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage/'
    ✔ Setting active project to '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage'
    ✔ Creating 'R/'
    ✔ Writing 'DESCRIPTION'
    ✔ Writing 'NAMESPACE'
    ✔ Setting active project to '<no active project>'
    ✔ Setting active project to '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage'
    ✔ Adding '^.*\\.tar\\.gz$' to '.Rbuildignore'
    ✔ Adding '^myFirstPackage\\.Rcheck$' to '.Rbuildignore'
    ✔ Adding '^cran-comments\\.md$' to '.Rbuildignore'
    ✔ Adding '^\\.Rprofile$' to '.Rbuildignore'
    ✔ Adding '^TODO\\.md$' to '.Rbuildignore'
    ✔ Adding '^index\\.html$' to '.Rbuildignore'
    * Adding `.Rprofile` to /tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage/.gitignore
    * Adding `*.tar.gz` to /tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage/.gitignore
    * Adding `myFirstPackage.Rcheck` to /tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/myFirstPackage/.gitignore
    * Creating `Makefile` from template.
    * Adding `Makefile` to `.Rbuildignore`.
    sh: whoami: not found
    sh: git: not found
    sh: git: not found
    sh: git: not found
    sh: git: not found
    * Creating `vignettes`.
    * Creating `vignettes/An_Introduction_to_myFirstPackage.Rmd` from template.
    * Creating `NEWS.md` from template.
    * Creating `README.Rmd` from template.
    * Adding `README.Rmd` to `.Rbuildignore`.
    * Adding pre-commit hook
    ✔ Writing '.git/hooks/pre-commit'
    * Creating `.travis.yml` from template.
    * Adding `.travis.yml` to `.Rbuildignore`.
    * Creating `.gitlab-ci.yml` from template.
    * Adding `.gitlab-ci.yml` to `.Rbuildignore`.
    * Creating `devel.R` from template.
    * Adding `devel.R` to `.Rbuildignore`.
    - make sure https://gitlab.com/foobar/myFirstPackage exists!
    ✔ Adding 'testthat' to Suggests field in DESCRIPTION
    ✔ Creating 'tests/testthat/'
    ✔ Writing 'tests/testthat.R'
    ● Call `use_test()` to initialize a basic test file and open it for editing.
    ● Call `use_test()` to initialize a basic test file and open it for editing.
    * Creating `R/throw.R` from template.
    * Creating `tests/testthat/test-throw.R` from template.
    * Creating `tests/runit.R` from template.
    * Creating `inst/runit_tests/runit-throw.R` from template.
    * Creating `make.R` from template.
    * Adding `make.R` to `.Rbuildignore`.
    * Creating `man-roxygen`.
    * Adding `man-roxygen` to `.Rbuildignore`.
    * Creating `man-roxygen/return_invisibly_null.R` from template.
    * Adding `man-roxygen/return_invisibly_null.R` to `.Rbuildignore`.
    ✔ Adding '^\\.log\\.Rout$' to '.Rbuildignore'
    * Creating `log`.
    * Adding `log` to `.Rbuildignore`.
     ordinary text without R code
    
    label: unnamed-chunk-2
     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
    label: unnamed-chunk-7 (with options)
    List of 2
     $ results: chr "hide"
     $ message: logi FALSE
    
    ✔ Creating '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/veryImportantPackage/'
    ✔ Setting active project to '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/veryImportantPackage'
    ✔ Creating 'R/'
    ✔ Writing 'DESCRIPTION'
    ✔ Writing 'NAMESPACE'
    label: unnamed-chunk-8
     ordinary text without R code
    
    label: unnamed-chunk-9 (with options)
    List of 1
     $ eval: logi FALSE
    
    label: unnamed-chunk-10 (with options)
    List of 1
     $ echo: logi FALSE
    
     ordinary text without R code
    
    label: unnamed-chunk-11 (with options)
    List of 1
     $ eval: logi FALSE
    
     inline R code fragments
    
    label: unnamed-chunk-12
     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
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     ordinary text without R code
    
    output file: /home/ripley/R/packages/tests32/packager.Rcheck/vign_test/packager/vignettes/An_Introduction_to_packager.asciidoc
    
    Warning in rasciidoc(file_name = adoc, write_to_disk = write_to_disk, asciidoc_args) :
     Can't find program `source-highlight`. Please install first (http://www.gnu.org/software/src-highlite/).
    Deactivating system calls errors!
    Warning in rasciidoc(file_name = adoc, write_to_disk = write_to_disk, asciidoc_args) :
     Can't find program `asciidoc`. Please install first (www.asciidoc.org).
    cloning into '/tmp/Rtmp20aa9Z/working_dir/RtmpwOaywf/asciidoc'...
    Receiving objects: 1% (81/8060), 24 kb
    Receiving objects: 11% (887/8060), 200 kb
    Receiving objects: 21% (1693/8060), 1390 kb
    Receiving objects: 31% (2499/8060), 3870 kb
    Receiving objects: 41% (3305/8060), 5773 kb
    Receiving objects: 51% (4111/8060), 9405 kb
    Receiving objects: 61% (4917/8060), 14172 kb
    Receiving objects: 71% (5723/8060), 18636 kb
    Receiving objects: 81% (6529/8060), 22747 kb
    Receiving objects: 91% (7335/8060), 27035 kb
    Receiving objects: 100% (8060/8060), 29213 kb, done.
    Error: processing vignette 'An_Introduction_to_packager.Rasciidoc' failed with diagnostics:
    Failed to locate ‘weave’ output file ‘An_Introduction_to_packager.pdf’ or ‘An_Introduction_to_packager.html’ for vignette with name ‘An_Introduction_to_packager’ and engine ‘rasciidoc::rasciidoc’. The following files exist in working directory ‘/home/ripley/R/packages/tests32/packager.Rcheck/vign_test/packager/vignettes’: ‘An_Introduction_to_packager.Rasciidoc’ (8676 bytes), ‘An_Introduction_to_packager.asciidoc’ (19878 bytes)
    --- failed re-building ‘An_Introduction_to_packager.Rasciidoc’
    
    SUMMARY: processing the following file failed:
     ‘An_Introduction_to_packager.Rasciidoc’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.3.0
Check: package dependencies
Result: FAIL
Flavor: r-release-linux-x86_64