Last updated on 2020-07-25 05:48:33 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.8 | 8.70 | 413.09 | 421.79 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.8 | 7.11 | 286.68 | 293.79 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.8 | 466.75 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.8 | 466.41 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.1.8 | 29.00 | 482.00 | 511.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.8 | 8.92 | 387.75 | 396.67 | ERROR | |
| r-patched-solaris-x86 | 0.1.8 | 573.50 | ERROR | |||
| r-release-linux-x86_64 | 0.1.8 | 8.88 | 383.92 | 392.80 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.1.8 | 21.00 | 362.00 | 383.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.1.8 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.8 | 16.00 | 463.00 | 479.00 | ERROR |
Version: 0.1.8
Check: examples
Result: ERROR
Running examples in 'eyetrackingR-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: analyze_time_clusters
> ### Title: Bootstrap analysis of time-clusters.
> ### Aliases: analyze_time_clusters analyze_time_clusters.time_cluster_data
>
> ### ** Examples
>
> data(word_recognition)
> data <- make_eyetrackingr_data(word_recognition,
+ participant_column = "ParticipantName",
+ trial_column = "Trial",
+ time_column = "TimeFromTrialOnset",
+ trackloss_column = "TrackLoss",
+ aoi_columns = c('Animate','Inanimate'),
+ treat_non_aoi_looks_as_missing = TRUE )
> response_window <- subset_by_window(data, window_start_time = 15500, window_end_time = 21000,
+ rezero = FALSE)
Avg. window length in new data will be 5500
> response_time <- make_time_sequence_data(response_window, time_bin_size = 500, aois = "Animate",
+ predictor_columns = "Sex")
>
> time_cluster_data <- make_time_cluster_data(data = response_time, predictor_column = "SexM",
+ aoi = "Animate", test = "lmer",
+ threshold = 1.5,
+ formula = LogitAdjusted ~ Sex + (1|Trial) + (1|ParticipantName))
Error: No tidy method for objects of class lmerMod
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running 'testthat.R' [49s/55s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
-- 1. Error: (unknown) (@test_analyze_time_bins.R#98) -------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
-- 2. Error: (unknown) (@test_cluster_analysis.R#88) --------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
== testthat results ===========================================================
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.8
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'divergence_vignette.Rmd' using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: `select_()` is deprecated as of dplyr 0.7.0.
Please use `select()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
--- finished re-building 'divergence_vignette.Rmd'
--- re-building 'growth_curve_analysis_vignette.Rmd' using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Quitting from lines 123-134 (growth_curve_analysis_vignette.Rmd)
Error: processing vignette 'growth_curve_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building 'growth_curve_analysis_vignette.Rmd'
--- re-building 'onset_contingent_analysis_vignette.Rmd' using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `arrange_()` is deprecated as of dplyr 0.7.0.
Please use `arrange()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `mutate_()` is deprecated as of dplyr 0.7.0.
Please use `mutate()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: Removed 7 rows containing non-finite values (stat_boxplot).
Warning: Removed 7 rows containing missing values (geom_point).
Quitting from lines 116-133 (onset_contingent_analysis_vignette.Rmd)
Error: processing vignette 'onset_contingent_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building 'onset_contingent_analysis_vignette.Rmd'
--- re-building 'preparing_your_data_vignette.Rmd' using rmarkdown
--- finished re-building 'preparing_your_data_vignette.Rmd'
--- re-building 'window_analysis_vignette.Rmd' using rmarkdown
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Quitting from lines 129-145 (window_analysis_vignette.Rmd)
Error: processing vignette 'window_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building 'window_analysis_vignette.Rmd'
SUMMARY: processing the following files failed:
'growth_curve_analysis_vignette.Rmd'
'onset_contingent_analysis_vignette.Rmd'
'window_analysis_vignette.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [32s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.8
Check: examples
Result: ERROR
Running examples in ‘eyetrackingR-Ex.R’ failed
The error most likely occurred in:
> ### Name: analyze_time_clusters
> ### Title: Bootstrap analysis of time-clusters.
> ### Aliases: analyze_time_clusters analyze_time_clusters.time_cluster_data
>
> ### ** Examples
>
> data(word_recognition)
> data <- make_eyetrackingr_data(word_recognition,
+ participant_column = "ParticipantName",
+ trial_column = "Trial",
+ time_column = "TimeFromTrialOnset",
+ trackloss_column = "TrackLoss",
+ aoi_columns = c('Animate','Inanimate'),
+ treat_non_aoi_looks_as_missing = TRUE )
> response_window <- subset_by_window(data, window_start_time = 15500, window_end_time = 21000,
+ rezero = FALSE)
Avg. window length in new data will be 5500
> response_time <- make_time_sequence_data(response_window, time_bin_size = 500, aois = "Animate",
+ predictor_columns = "Sex")
>
> time_cluster_data <- make_time_cluster_data(data = response_time, predictor_column = "SexM",
+ aoi = "Animate", test = "lmer",
+ threshold = 1.5,
+ formula = LogitAdjusted ~ Sex + (1|Trial) + (1|ParticipantName))
Error: No tidy method for objects of class lmerMod
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [50s/58s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.8
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘divergence_vignette.Rmd’ using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: `select_()` is deprecated as of dplyr 0.7.0.
Please use `select()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
--- finished re-building ‘divergence_vignette.Rmd’
--- re-building ‘growth_curve_analysis_vignette.Rmd’ using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Quitting from lines 123-134 (growth_curve_analysis_vignette.Rmd)
Error: processing vignette 'growth_curve_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘growth_curve_analysis_vignette.Rmd’
--- re-building ‘onset_contingent_analysis_vignette.Rmd’ using rmarkdown
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `arrange_()` is deprecated as of dplyr 0.7.0.
Please use `arrange()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `mutate_()` is deprecated as of dplyr 0.7.0.
Please use `mutate()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: Removed 7 rows containing non-finite values (stat_boxplot).
Warning: Removed 7 rows containing missing values (geom_point).
Quitting from lines 116-133 (onset_contingent_analysis_vignette.Rmd)
Error: processing vignette 'onset_contingent_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘onset_contingent_analysis_vignette.Rmd’
--- re-building ‘preparing_your_data_vignette.Rmd’ using rmarkdown
--- finished re-building ‘preparing_your_data_vignette.Rmd’
--- re-building ‘window_analysis_vignette.Rmd’ using rmarkdown
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Quitting from lines 129-145 (window_analysis_vignette.Rmd)
Error: processing vignette 'window_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘window_analysis_vignette.Rmd’
SUMMARY: processing the following files failed:
‘growth_curve_analysis_vignette.Rmd’
‘onset_contingent_analysis_vignette.Rmd’
‘window_analysis_vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [51s/71s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.8
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running 'testthat.R' [52s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
-- 1. Error: (unknown) (@test_analyze_time_bins.R#98) -------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
-- 2. Error: (unknown) (@test_cluster_analysis.R#88) --------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
== testthat results ===========================================================
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [44s/48s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [62s/68s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.8
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘divergence_vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: `select_()` is deprecated as of dplyr 0.7.0.
Please use `select()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
--- finished re-building ‘divergence_vignette.Rmd’
--- re-building ‘growth_curve_analysis_vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: Removed 37 rows containing non-finite values (stat_summary).
Warning: Removed 37 rows containing non-finite values (stat_summary).
Quitting from lines 123-134 (growth_curve_analysis_vignette.Rmd)
Error: processing vignette 'growth_curve_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘growth_curve_analysis_vignette.Rmd’
--- re-building ‘onset_contingent_analysis_vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `arrange_()` is deprecated as of dplyr 0.7.0.
Please use `arrange()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `mutate_()` is deprecated as of dplyr 0.7.0.
Please use `mutate()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: Removed 7 rows containing non-finite values (stat_boxplot).
Warning: Removed 7 rows containing missing values (geom_point).
Quitting from lines 116-133 (onset_contingent_analysis_vignette.Rmd)
Error: processing vignette 'onset_contingent_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘onset_contingent_analysis_vignette.Rmd’
--- re-building ‘preparing_your_data_vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘preparing_your_data_vignette.Rmd’
--- re-building ‘window_analysis_vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `fun.y` is deprecated. Use `fun` instead.
Warning: `group_by_()` is deprecated as of dplyr 0.7.0.
Please use `group_by()` instead.
See vignette('programming') for more help
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Warning: `summarise_()` is deprecated as of dplyr 0.7.0.
Please use `summarise()` instead.
This warning is displayed once every 8 hours.
Call `lifecycle::last_warnings()` to see where this warning was generated.
Quitting from lines 129-145 (window_analysis_vignette.Rmd)
Error: processing vignette 'window_analysis_vignette.Rmd' failed with diagnostics:
No tidy method for objects of class lmerMod
--- failed re-building ‘window_analysis_vignette.Rmd’
SUMMARY: processing the following files failed:
‘growth_curve_analysis_vignette.Rmd’
‘onset_contingent_analysis_vignette.Rmd’
‘window_analysis_vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [44s/49s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
── 1. Error: (unknown) (@test_analyze_time_bins.R#98) ─────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
── 2. Error: (unknown) (@test_cluster_analysis.R#88) ──────────────────────────
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running 'testthat.R' [37s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
-- 1. Error: (unknown) (@test_analyze_time_bins.R#98) -------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
-- 2. Error: (unknown) (@test_cluster_analysis.R#88) --------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
== testthat results ===========================================================
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.1.8
Check: tests
Result: ERROR
Running 'testthat.R' [50s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(eyetrackingR)
Loading required package: dplyr
Attaching package: 'dplyr'
The following object is masked from 'package:testthat':
matches
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
>
> test_check("eyetrackingR")
-- 1. Error: (unknown) (@test_analyze_time_bins.R#98) -------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::analyze_time_bins(...)
13. eyetrackingR:::the_test(...)
15. broom:::tidy.default(res_err_warn$res, effects = "fixed")
-- 2. Error: (unknown) (@test_cluster_analysis.R#88) --------------------------
No tidy method for objects of class lmerMod
Backtrace:
1. eyetrackingR::make_time_cluster_data(...)
16. eyetrackingR:::the_test(...)
18. broom:::tidy.default(res_err_warn$res, effects = "fixed")
== testthat results ===========================================================
[ OK: 27 | SKIPPED: 0 | WARNINGS: 4 | FAILED: 2 ]
1. Error: (unknown) (@test_analyze_time_bins.R#98)
2. Error: (unknown) (@test_cluster_analysis.R#88)
Error: testthat unit tests failed
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64