Last updated on 2021-01-27 09:49:47 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.8 | 10.55 | 66.23 | 76.78 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.8 | 6.78 | 50.76 | 57.54 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.8 | 100.36 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.8 | 91.18 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.8 | 18.00 | 83.00 | 101.00 | NOTE | |
| r-patched-linux-x86_64 | 0.8 | 9.00 | 61.70 | 70.70 | NOTE | |
| r-patched-solaris-x86 | 0.8 | 123.00 | NOTE | |||
| r-release-linux-x86_64 | 0.8 | 9.16 | 61.33 | 70.49 | NOTE | |
| r-release-macos-x86_64 | 0.8 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 0.8 | 18.00 | 64.00 | 82.00 | NOTE | |
| r-oldrel-macos-x86_64 | 0.8 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.8 | 13.00 | 76.00 | 89.00 | NOTE |
Version: 0.8
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls to packages already attached by Depends:
'Matrix' 'splines'
Please remove these calls from your code.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.8
Check: R code for possible problems
Result: NOTE
.Rsquared: no visible global function definition for 'poly'
.alignment: no visible global function definition for 'lm'
.alignment: no visible global function definition for 'as.formula'
.biweight.FTICRMS: no visible global function definition for 'median'
.cluster.peaks: no visible global function definition for 'lm'
.cluster.peaks: no visible global function definition for 'predict'
.cluster.peaks: no visible global function definition for 'median'
baseline : <anonymous>: no visible global function definition for
'qnorm'
baseline: no visible global function definition for 'median'
baseline: no visible global function definition for 'new'
display.tests: no visible binding for global variable 'parameter.list'
display.tests: no visible binding for global variable 'sigs'
display.tests: no visible binding for global variable 'clust.mat'
display.tests : <anonymous>: no visible binding for global variable
'clust.mat'
display.tests : <anonymous>: no visible binding for global variable
'parameter.list'
run.analysis: no visible global function definition for 'terms'
run.analysis: no visible binding for global variable 't.test'
run.analysis: no visible binding for global variable 'lm'
run.analysis : pval.fcn: no visible binding for global variable 'pf'
run.analysis: no visible binding for global variable 'centers'
run.baselines: no visible global function definition for 'read.csv'
run.baselines: no visible global function definition for 'read.table'
run.cluster.matrix: no visible binding for global variable 'amps'
run.cluster.matrix: no visible global function definition for 'median'
run.cluster.matrix: no visible global function definition for 'predict'
run.cluster.matrix: no visible global function definition for 'lm'
run.cluster.matrix: no visible binding for global variable
'clust.constant'
run.cluster.matrix: no visible binding for global variable 'spect.base'
run.lrg.peaks: no visible binding for global variable 'spect.base'
run.lrg.peaks: no visible global function definition for 'approx'
run.strong.peaks: no visible global function definition for 'median'
run.strong.peaks: no visible global function definition for 'predict'
run.strong.peaks: no visible global function definition for 'cor'
Undefined global functions or variables:
amps approx as.formula centers clust.constant clust.mat cor lm median
new parameter.list pf poly predict qnorm read.csv read.table sigs
spect.base t.test terms
Consider adding
importFrom("methods", "new")
importFrom("stats", "approx", "as.formula", "cor", "lm", "median",
"pf", "poly", "predict", "qnorm", "t.test", "terms")
importFrom("utils", "read.csv", "read.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.8
Check: Rd files
Result: NOTE
prepare_Rd: baseline.Rd:123: Dropping empty section \examples
prepare_Rd: display.tests.Rd:43: Dropping empty section \references
prepare_Rd: display.tests.Rd:57: Dropping empty section \examples
prepare_Rd: extract.pars.Rd:114: Dropping empty section \examples
prepare_Rd: locate.peaks.Rd:72: Dropping empty section \examples
prepare_Rd: make.par.file.Rd:117: Dropping empty section \examples
prepare_Rd: run.all.Rd:76: Dropping empty section \examples
prepare_Rd: run.analysis.Rd:153: Dropping empty section \examples
prepare_Rd: run.baselines.Rd:91: Dropping empty section \examples
prepare_Rd: run.cluster.matrix.Rd:171: Dropping empty section \examples
prepare_Rd: run.lrg.peaks.Rd:95: Dropping empty section \examples
prepare_Rd: run.peaks.Rd:99: Dropping empty section \examples
prepare_Rd: run.strong.peaks.Rd:115: Dropping empty section \examples
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64