Last updated on 2021-03-07 07:47:55 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 4.30 | 64.10 | 68.40 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 3.40 | 46.35 | 49.75 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 96.79 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 86.12 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.1.3 | 8.00 | 114.00 | 122.00 | NOTE | |
| r-devel-windows-x86_64-gcc10-UCRT | 1.1.3 | OK | ||||
| r-patched-linux-x86_64 | 1.1.3 | 4.59 | 61.72 | 66.31 | OK | |
| r-patched-solaris-x86 | 1.1.3 | 87.00 | WARN | |||
| r-release-linux-x86_64 | 1.1.3 | 4.37 | 64.09 | 68.46 | OK | |
| r-release-macos-x86_64 | 1.1.3 | WARN | ||||
| r-release-windows-ix86+x86_64 | 1.1.3 | 8.00 | 101.00 | 109.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.1.3 | WARN | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1.3 | 6.00 | 93.00 | 99.00 | NOTE |
Version: 1.1.3
Check: installed package size
Result: NOTE
installed size is 10.6Mb
sub-directories of 1Mb or more:
doc 9.3Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.1.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘chart_themes.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
g3viz: visualizing gene/genome/gentics data for fun.
- Pfam (v33.1)
- UniProt (date: 2020/08/24)
Any questions, please send emails to <g3viz.group@gmail.com> or post on GitHub <https://github.com/G3viz/g3viz/issues>.
Please send questions to cbioportal@googlegroups.com
Quitting from lines 48-58 (chart_themes.Rmd)
Error: processing vignette 'chart_themes.Rmd' failed with diagnostics:
invalid 'path' argument
--- failed re-building ‘chart_themes.Rmd’
--- re-building ‘introduction.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
g3viz: visualizing gene/genome/gentics data for fun.
- Pfam (v33.1)
- UniProt (date: 2020/08/24)
Any questions, please send emails to <g3viz.group@gmail.com> or post on GitHub <https://github.com/G3viz/g3viz/issues>.
Quitting from lines 108-119 (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
invalid 'path' argument
--- failed re-building ‘introduction.Rmd’
SUMMARY: processing the following files failed:
‘chart_themes.Rmd’ ‘introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.1.3
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘chart_themes.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
g3viz: visualizing gene/genome/gentics data for fun.
- Pfam (v33.1)
- UniProt (date: 2020/08/24)
Any questions, please send emails to <g3viz.group@gmail.com> or post on GitHub <https://github.com/G3viz/g3viz/issues>.
Please send questions to cbioportal@googlegroups.com
Quitting from lines 48-58 (chart_themes.Rmd)
Error: processing vignette 'chart_themes.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘chart_themes.Rmd’
--- re-building ‘introduction.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
g3viz: visualizing gene/genome/gentics data for fun.
- Pfam (v33.1)
- UniProt (date: 2020/08/24)
Any questions, please send emails to <g3viz.group@gmail.com> or post on GitHub <https://github.com/G3viz/g3viz/issues>.
Quitting from lines 108-119 (introduction.Rmd)
Error: processing vignette 'introduction.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘introduction.Rmd’
SUMMARY: processing the following files failed:
‘chart_themes.Rmd’ ‘introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64