CRAN Package Check Results for Package Mega2R

Last updated on 2021-04-06 08:51:26 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.8 60.84 462.07 522.91 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.8 48.00 357.27 405.27 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.8 245.01 WARN
r-devel-linux-x86_64-fedora-gcc 1.0.8 649.10 NOTE
r-devel-windows-ix86+x86_64 1.0.8 83.00 521.00 604.00 NOTE
r-devel-windows-x86_64-gcc10-UCRT 1.0.8 WARN
r-patched-linux-x86_64 1.0.8 48.89 404.61 453.50 OK
r-release-linux-x86_64 1.0.8 50.90 406.50 457.40 OK
r-release-macos-x86_64 1.0.8 OK
r-release-windows-ix86+x86_64 1.0.8 86.00 523.00 609.00 WARN
r-oldrel-macos-x86_64 1.0.8 ERROR
r-oldrel-windows-ix86+x86_64 1.0.8 105.00 613.00 718.00 OK

Check Details

Version: 1.0.8
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-x86_64-gcc10-UCRT

Version: 1.0.8
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘TxDb.Hsapiens.UCSC.hg19.knownGene’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64-gcc10-UCRT

Version: 1.0.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘mega2rtutorial.Rmd’ using rmarkdown
    Loading required package: SKAT
    Loading required package: Matrix
    Loading required package: SPAtest
    Loading required package: pedgene
    Loading required package: CompQuadForm
    Loading required package: survey
    Loading required package: grid
    Loading required package: survival
    
    Attaching package: 'survey'
    
    The following object is masked from 'package:graphics':
    
     dotchart
    
    Loading required package: kinship2
    Loading required package: quadprog
    Loading required package: gdsfmt
    Quitting from lines 694-696 (mega2rtutorial.Rmd)
    Error: processing vignette 'mega2rtutorial.Rmd' failed with diagnostics:
    there is no package called 'TxDb.Hsapiens.UCSC.hg19.knownGene'
    --- failed re-building ‘mega2rtutorial.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘mega2rtutorial.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64-gcc10-UCRT

Version: 1.0.8
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: package 'Matrix' was built under R version 4.0.5
Flavor: r-release-windows-ix86+x86_64

Version: 1.0.8
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking:
     'TxDb.Hsapiens.UCSC.hg19.knownGene', 'org.Hs.eg.db'
Flavor: r-oldrel-macos-x86_64

Version: 1.0.8
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-oldrel-macos-x86_64