CRAN Package Check Results for Package topologyGSA

Last updated on 2021-05-27 12:54:30 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.6 48.55 425.03 473.58 ERROR
r-devel-linux-x86_64-debian-gcc 1.4.6 41.58 318.05 359.63 ERROR
r-devel-linux-x86_64-fedora-clang 1.4.6 610.18 ERROR
r-devel-linux-x86_64-fedora-gcc 1.4.6 598.87 ERROR
r-devel-windows-x86_64 1.4.6 133.00 335.00 468.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.4.6 ERROR
r-patched-linux-x86_64 1.4.6 47.34 409.40 456.74 OK
r-patched-solaris-x86 1.4.6 812.50 OK
r-release-linux-x86_64 1.4.6 48.15 409.26 457.41 OK
r-release-macos-x86_64 1.4.6 ERROR
r-release-windows-ix86+x86_64 1.4.6 102.00 456.00 558.00 OK
r-oldrel-macos-x86_64 1.4.6 ERROR
r-oldrel-windows-ix86+x86_64 1.4.6 101.00 409.00 510.00 OK

Check Details

Version: 1.4.6
Check: examples
Result: ERROR
    Running examples in 'topologyGSA-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: clique.mean.test
    > ### Title: Comparison of all the cliques of a pathway.
    > ### Aliases: clique.mean.test
    >
    > ### ** Examples
    >
    > data(examples)
    >
    > clique.mean.test(y1, y2, dag_bcell, 0.05)
    Error in matrix(rep(y1.mean, y1.num * gene.num), y1.num, gene.num, byrow = T) :
     data length differs from size of matrix: [45325 != 37 x 35]
    Calls: clique.mean.test -> .runCliqueVarTest -> .estimateCov -> matrix
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.4.6
Check: examples
Result: ERROR
    Running examples in ‘topologyGSA-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clique.mean.test
    > ### Title: Comparison of all the cliques of a pathway.
    > ### Aliases: clique.mean.test
    >
    > ### ** Examples
    >
    > data(examples)
    >
    > clique.mean.test(y1, y2, dag_bcell, 0.05)
    Error in matrix(rep(y1.mean, y1.num * gene.num), y1.num, gene.num, byrow = T) :
     data length differs from size of matrix: [45325 != 37 x 35]
    Calls: clique.mean.test -> .runCliqueVarTest -> .estimateCov -> matrix
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.4.6
Check: package dependencies
Result: ERROR
    Packages required but not available: 'gRbase', 'qpgraph'
    
    Package suggested but not available for checking: 'Rgraphviz'
    
    See section 'The DESCRIPTION file' in the 'Writing R Extensions'
    manual.
Flavor: r-devel-windows-x86_64-gcc10-UCRT

Version: 1.4.6
Check: package dependencies
Result: ERROR
    Package required but not available: ‘qpgraph’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-macos-x86_64

Version: 1.4.6
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-oldrel-macos-x86_64