CRAN Package Check Results for Package haploR

Last updated on 2021-07-29 05:50:05 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 4.0.2 OK
r-devel-linux-x86_64-debian-gcc 4.0.2 4.46 45.31 49.77 OK
r-devel-linux-x86_64-fedora-clang 4.0.2 84.43 OK
r-devel-linux-x86_64-fedora-gcc 4.0.2 73.80 OK
r-devel-windows-x86_64 4.0.2 7.00 165.00 172.00 WARN
r-devel-windows-x86_64-gcc10-UCRT 4.0.2 OK
r-patched-linux-x86_64 4.0.2 5.78 55.74 61.52 OK
r-patched-solaris-x86 4.0.2 109.60 WARN
r-release-linux-x86_64 4.0.2 5.38 55.55 60.93 OK
r-release-macos-arm64 4.0.2 OK
r-release-macos-x86_64 4.0.2 OK
r-release-windows-ix86+x86_64 4.0.2 13.00 85.00 98.00 OK
r-oldrel-macos-x86_64 4.0.2 OK
r-oldrel-windows-ix86+x86_64 4.0.2 10.00 87.00 97.00 OK

Check Details

Version: 4.0.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'haplor-vignette.Rmd' using rmarkdown
    URL does not seem to exist: https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php
    Here's the original error message:
    XML content does not seem to be XML: ''
    Quitting from lines 279-288 (haplor-vignette.Rmd)
    Error: processing vignette 'haplor-vignette.Rmd' failed with diagnostics:
    object 'out' not found
    --- failed re-building 'haplor-vignette.Rmd'
    
    SUMMARY: processing the following file failed:
     'haplor-vignette.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-windows-x86_64

Version: 4.0.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘haplor-vignette.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    URL does not seem to exist: https://pubs.broadinstitute.org/mammals/haploreg/haploreg.php
    Here's the original error message:
    XML content does not seem to be XML: ''
    Quitting from lines 279-288 (haplor-vignette.Rmd)
    Error: processing vignette 'haplor-vignette.Rmd' failed with diagnostics:
    object 'out' not found
    --- failed re-building ‘haplor-vignette.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘haplor-vignette.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86