CRAN Package Check Results for Package APCalign

Last updated on 2024-03-26 05:58:46 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.3 9.93 581.82 591.75 OK
r-devel-linux-x86_64-debian-gcc 0.1.3 7.77 508.27 516.04 OK
r-devel-linux-x86_64-fedora-clang 0.1.3 689.93 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.3 786.46 NOTE
r-devel-windows-x86_64 0.1.3 10.00 528.00 538.00 OK
r-patched-linux-x86_64 0.1.3 9.21 623.12 632.33 OK
r-release-linux-x86_64 0.1.3 6.55 644.12 650.67 OK
r-release-macos-arm64 0.1.3 262.00 OK
r-release-macos-x86_64 0.1.3 846.00 OK
r-release-windows-x86_64 0.1.3 10.00 660.00 670.00 OK
r-oldrel-macos-arm64 0.1.3 267.00 OK
r-oldrel-windows-x86_64 0.1.3 10.00 698.00 708.00 OK

Check Details

Version: 0.1.3
Check: data for non-ASCII characters
Result: NOTE Note: found 4 marked UTF-8 strings Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.3
Check: tests
Result: ERROR Running ‘testthat.R’ [10m/25m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(APCalign) > > test_check("APCalign") Loading resources......done Checking alignments of 15 taxa -> 0 names already matched; 0 names checked but without a match; 15 taxa yet to be checked Checking alignments of 15 taxa -> 0 names already matched; 0 names checked but without a match; 15 taxa yet to be checked Checking alignments of 15 taxa -> 0 names already matched; 0 names checked but without a match; 15 taxa yet to be checked Checking alignments of 3 taxa -> 0 names already matched; 0 names checked but without a match; 3 taxa yet to be checked Checking alignments of 3 taxa -> 0 names already matched; 0 names checked but without a match; 3 taxa yet to be checked Checking alignments of 50 taxa -> 0 names already matched; 0 names checked but without a match; 50 taxa yet to be checked Checking alignments of 2 taxa -> 0 names already matched; 0 names checked but without a match; 2 taxa yet to be checked Checking alignments of 2 taxa -> 0 names already matched; 0 names checked but without a match; 2 taxa yet to be checked Checking alignments of 2 taxa -> 0 names already matched; 0 names checked but without a match; 2 taxa yet to be checked Checking alignments of 1 taxa -> 0 names already matched; 0 names checked but without a match; 1 taxa yet to be checked Checking alignments of 1 taxa -> 0 names already matched; 0 names checked but without a match; 1 taxa yet to be checked Checking alignments of 14 taxa -> 0 names already matched; 0 names checked but without a match; 14 taxa yet to be checked Checking alignments of 14 taxa -> 0 names already matched; 0 names checked but without a match; 14 taxa yet to be checked Checking alignments of 4 taxa -> 0 names already matched; 0 names checked but without a match; 4 taxa yet to be checked Checking alignments of 4 taxa -> 0 names already matched; 0 names checked but without a match; 4 taxa yet to be checked Checking alignments of 2 taxa -> 0 names already matched; 0 names checked but without a match; 2 taxa yet to be checked Checking alignments of 3 taxa -> 0 names already matched; 0 names checked but without a match; 3 taxa yet to be checked Checking alignments of 3 taxa -> 0 names already matched; 0 names checked but without a match; 3 taxa yet to be checked Checking alignments of 4 taxa -> 0 names already matched; 0 names checked but without a match; 4 taxa yet to be checked Checking alignments of 4 taxa -> 0 names already matched; 0 names checked but without a match; 4 taxa yet to be checked Checking alignments of 4 taxa -> 0 names already matched; 0 names checked but without a match; 4 taxa yet to be checked Checking alignments of 15 taxa -> 0 names already matched; 0 names checked but without a match; 15 taxa yet to be checked Checking alignments of 45 taxa -> 0 names already matched; 0 names checked but without a match; 45 taxa yet to be checked Checking alignments of 45 taxa -> 0 names already matched; 0 names checked but without a match; 45 taxa yet to be checked Checking alignments of 45 taxa -> 0 names already matched; 0 names checked but without a match; 45 taxa yet to be checked Checking alignments of 45 taxa -> 0 names already matched; 0 names checked but without a match; 45 taxa yet to be checked Checking alignments of 223 taxa -> 0 names already matched; 0 names checked but without a match; 223 taxa yet to be checked API currently down, try again later [ FAIL 1 | WARN 0 | SKIP 0 | PASS 85 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-connection.R:8:3'): Complains when network is down ───────────── <vctrs_error_scalar_type/vctrs_error/rlang_error/error/condition> Error in `vec_init()`: `x` must be a vector, not `NULL`. Backtrace: ▆ 1. ├─testthat::expect_visible(default_version()) at test-connection.R:8:3 2. │ └─base::withVisible(call) 3. ├─APCalign:::default_version() 4. │ └─dplyr::first(versions) 5. │ └─dplyr::nth(x, 1L, order_by = order_by, default = default, na_rm = na_rm) 6. │ └─dplyr:::check_nth_default(default, x = x) 7. │ └─vctrs::vec_init(x) 8. └─vctrs:::stop_scalar_type(`<fn>`(NULL), "x", `<fn>`(vec_init())) 9. └─vctrs:::stop_vctrs(...) 10. └─rlang::abort(message, class = c(class, "vctrs_error"), ..., call = call) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 85 ] Error: Test failures In addition: There were 18 warnings (use warnings() to see them) Execution halted Flavor: r-devel-linux-x86_64-fedora-clang