Last updated on 2018-06-01 08:49:12 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 16.03 | 8.73 | 66.68 | 75.41 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 16.03 | 7.25 | 58.04 | 65.29 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 16.03 | 138.46 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 16.03 | 127.02 | OK | |||
| r-devel-windows-ix86+x86_64 | 16.03 | 19.00 | 146.00 | 165.00 | NOTE | |
| r-patched-linux-x86_64 | 16.03 | 8.73 | 63.55 | 72.28 | ERROR | |
| r-patched-solaris-x86 | 16.03 | 160.40 | OK | |||
| r-release-linux-x86_64 | 16.03 | 6.63 | 63.20 | 69.83 | ERROR | |
| r-release-windows-ix86+x86_64 | 16.03 | 12.00 | 133.00 | 145.00 | NOTE | |
| r-release-osx-x86_64 | 16.03 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 16.03 | 11.00 | 115.00 | 126.00 | OK | |
| r-oldrel-osx-x86_64 | 16.03 | NOTE |
Version: 16.03
Check: examples
Result: ERROR
Running examples in ‘RObsDat-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: RObsDat-package
> ### Title: R-Package to the observations Data Model from CUAHSI
> ### Aliases: RObsDat-package RObsDat
> ### Keywords: package
>
> ### ** Examples
>
> example(addDataValues)
addDtV> #connect to database
addDtV> getDefaultDB()
Loading required namespace: RSQLite
addDtV> ## Not run:
addDtV> ##D #connect to postgreSQL database
addDtV> ##D require("RObsDat")
addDtV> ##D require("RPostgreSQL")
addDtV> ##D m <- dbDriver("PostgreSQL")
addDtV> ##D con <- dbConnect(m, user="a_user", password="secret", dbname="obsdat")
addDtV> ##D sqhandler <- new("odm1_1Ver", con=con)
addDtV> ##D options(odm.handler=sqhandler)
addDtV> ##D
addDtV> ##D #connect to MySQL database
addDtV> ##D require("RObsDat")
addDtV> ##D require("RMySQL")
addDtV> ##D m <- dbDriver("MySQL")
addDtV> ##D con <- dbConnect(m, user="a_user", password="secret", dbname="obsdat")
addDtV> ##D sqhandler <- new("odm1_1Ver", con=con)
addDtV> ##D options(odm.handler=sqhandler)
addDtV> ##D
addDtV> ##D #connect to SQLite database
addDtV> ##D require("RObsDat")
addDtV> ##D require("RSQLite")
addDtV> ##D m <- dbDriver("SQLite")
addDtV> ##D dbname = "database.db"
addDtV> ##D con <- dbConnect(m, dbname = dbname)
addDtV> ##D sqhandler <- new("odm1_1Ver", con=con)
addDtV> ##D options(odm.handler=sqhandler)
addDtV> ##D
addDtV> ## End(Not run)
addDtV>
addDtV> #Store metadata in database
addDtV> addSite(Code="test", Name="Virtual test site", x=-5, y=46,
addDtV+ LatLongDatum="WGS84", Elevation=1500, State="Germany")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> addVariable(Name="Distance", Unit="cm", ValueType="Field Observation",
addDtV+ GeneralCategory="Instrumentation", Code="test_dist")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> addQualityControlLevel(ID=6,Code="test_ok", Definition="The default")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> addISOMetadata(TopicCategory="Unknown", Title="Testdata",
addDtV+ Abstract="This data is created to test the functions of RObsDat")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> addSource(Organization="Your Org", SourceDescription="Madeup data",
addDtV+ SourceLink="RObsDat Documentation", ContactName="Yourself",
addDtV+ Metadata="Testdata")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> library(xts)
addDtV> library(spacetime)
addDtV> example.data <- xts(1:40, seq(as.POSIXct("2014-01-01", tz="UTC"),
addDtV+ as.POSIXct("2014-02-09", tz="UTC"), length.out=40))
addDtV> example.data[40] <- 30
addDtV> example.data[35] <- 22
addDtV> addDataValues(example.data[1:20], Site="Virtual test site", Variable="test_dist",
addDtV+ Source="Madeup", QualityControlLevel="test_ok")
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Importing column 1 out of 1
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> #Avoid duplicates automatically
addDtV> example.data[15] <- 30
addDtV> addDataValues(example.data, Site="Virtual test site", Variable="test_dist",
addDtV+ Source="Madeup", QualityControlLevel="test_ok")
Importing column 1 out of 1
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
addDtV> inDB <- getDataValues(Site="test")
addDtV> stplot(inDB, mode="ts")
addDtV> #Version management
addDtV> inDB <- getDataValues(Site="test")
addDtV> to.correct <- which(inDB@data > 30)
addDtV> inDB@data[to.correct,] <- 20
addDtV> if(NROW(inDB@data)>=30){
addDtV+ inDB@data[30,] <- 32
addDtV+ updateDataValues(inDB, "Correction of wrong value")
addDtV+ }
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Warning in result_fetch(res@ptr, n = n) :
Don't need to call dbFetch() for statements, only for queries
Error in if (is.na(the.vect[rownum])) { : the condition has length > 1
Calls: example ... IupdateDataValues -> IupdateDataValues -> .local -> paste -> sv
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 16.03
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'SSOAP'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64