Last updated on 2019-01-28 08:48:19 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 21.04 | 162.03 | 183.07 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.2.1 | 17.94 | 124.35 | 142.29 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 0.2.1 | 212.89 | WARN | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.1 | WARN | ||||
| r-devel-windows-ix86+x86_64 | 0.2.1 | 35.00 | 170.00 | 205.00 | WARN | |
| r-patched-linux-x86_64 | 0.2.1 | 19.88 | 150.74 | 170.62 | NOTE | |
| r-patched-solaris-x86 | 0.2.1 | 266.00 | NOTE | |||
| r-release-linux-x86_64 | 0.2.1 | 21.87 | 148.15 | 170.02 | NOTE | |
| r-release-windows-ix86+x86_64 | 0.2.1 | 46.00 | 236.00 | 282.00 | NOTE | |
| r-release-osx-x86_64 | 0.2.1 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.2.1 | 54.00 | 178.00 | 232.00 | NOTE | |
| r-oldrel-osx-x86_64 | 0.2.1 | NOTE |
Version: 0.2.1
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
The prototype for class “BioGeoBEARS_run” has undefined slot(s): 'abbr', 'description', 'BioGeoBEARS_model_object', 'trfn', 'geogfn', 'timesfn', 'distsfn', 'dispersal_multipliers_fn', 'area_of_areas_fn', 'areas_allowed_fn', 'detects_fn', 'controls_fn', 'max_range_size', 'force_sparse', 'use_detection_model', 'print_optim', 'wd', 'num_cores_to_use', 'cluster_already_open', 'use_optimx', 'return_condlikes_table', 'calc_TTL_loglike_from_condlikes_table', 'calc_ancprobs', 'speedup'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64
Version: 0.2.1
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls to packages already attached by Depends:
‘ape’ ‘cladoRcpp’ ‘phylobase’ ‘rexpokit’
Please remove these calls from your code.
Packages in Depends field not imported from:
‘ape’ ‘cladoRcpp’ ‘methods’ ‘phylobase’ ‘rexpokit’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
':::' calls which should be '::':
‘ape:::floating.pie.asp’ ‘cladoRcpp:::areas_list_to_states_list_old’
See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.2.1
Check: R code for possible problems
Result: NOTE
LGcpp_splits_fn_to_table: no visible global function definition for
‘read.table’
LGcpp_splits_fn_to_table2: no visible global function definition for
‘read.table’
LGcpp_states_fn_to_table: no visible global function definition for
‘read.table’
LGpy_splits_fn_to_table: no visible global function definition for
‘read.table’
areas_list_to_states_list_new: no visible global function definition
for ‘numstates_from_numareas’
areas_list_to_states_list_new: no visible global function definition
for ‘rcpp_areas_list_to_states_list’
axisPhylo2: no visible binding for global variable ‘.PlotPhyloEnv’
axisPhylo2: no visible global function definition for ‘axis’
bears_2param_DIVA_fast: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_2param_DIVA_fast: no visible global function definition for
‘read.tree’
bears_2param_DIVA_fast : function_to_optim: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_2param_DIVA_fast: no visible global function definition for
‘optim’
bears_2param_DIVA_fast: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_2param_standard_fast: no visible global function definition for
‘read.tree’
bears_2param_standard_fast : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast: no visible global function definition for
‘optim’
bears_2param_standard_fast: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_fixnode: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_2param_standard_fast_fixnode: no visible global function
definition for ‘read.tree’
bears_2param_standard_fast_fixnode : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_fixnode: no visible global function
definition for ‘optim’
bears_2param_standard_fast_fortest: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_2param_standard_fast_fortest: no visible global function
definition for ‘read.tree’
bears_2param_standard_fast_fortest : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_fortest: no visible global function
definition for ‘optim’
bears_2param_standard_fast_fortest: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_symOnly: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_2param_standard_fast_symOnly: no visible global function
definition for ‘read.tree’
bears_2param_standard_fast_symOnly : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_symOnly: no visible global function
definition for ‘optim’
bears_2param_standard_fast_symOnly: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_symOnly_simp: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_2param_standard_fast_symOnly_simp: no visible global function
definition for ‘read.tree’
bears_2param_standard_fast_symOnly_simp : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_fast_symOnly_simp: no visible global function
definition for ‘optim’
bears_2param_standard_fast_symOnly_simp: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_slowQ_slowSP: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_2param_standard_slowQ_slowSP: no visible global function
definition for ‘read.tree’
bears_2param_standard_slowQ_slowSP : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_2param_standard_slowQ_slowSP: no visible global function
definition for ‘optim’
bears_2param_standard_slowQ_slowSP: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_3param_standard_fast: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_3param_standard_fast: no visible global function definition for
‘read.tree’
bears_3param_standard_fast : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_3param_standard_fast: no visible global function definition for
‘optim’
bears_3param_standard_fast: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_3param_standard_fast_fixnode: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_3param_standard_fast_fixnode: no visible global function
definition for ‘read.tree’
bears_3param_standard_fast_fixnode : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_3param_standard_fast_fixnode: no visible global function
definition for ‘optim’
bears_3param_standard_fast_noJ: no visible global function definition
for ‘rcpp_areas_list_to_states_list’
bears_3param_standard_fast_noJ: no visible global function definition
for ‘read.tree’
bears_3param_standard_fast_noJ : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_3param_standard_fast_noJ: no visible global function definition
for ‘optim’
bears_3param_standard_fast_noJ: no visible global function definition
for ‘rcpp_states_list_to_DEmat’
bears_4param_standard_fast: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_4param_standard_fast: no visible global function definition for
‘read.tree’
bears_4param_standard_fast : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_4param_standard_fast: no visible global function definition for
‘optim’
bears_4param_standard_fast: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_5param_standard_fast: no visible global function definition for
‘read.tree’
bears_5param_standard_fast : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast: no visible global function definition for
‘optim’
bears_5param_standard_fast: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast_diffstart: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_5param_standard_fast_diffstart: no visible global function
definition for ‘read.tree’
bears_5param_standard_fast_diffstart : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast_diffstart: no visible global function
definition for ‘optim’
bears_5param_standard_fast_diffstart: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast_v: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_5param_standard_fast_v: no visible global function definition for
‘read.tree’
bears_5param_standard_fast_v : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_5param_standard_fast_v: no visible global function definition for
‘optim’
bears_5param_standard_fast_v: no visible global function definition for
‘rcpp_states_list_to_DEmat’
bears_6param_standard_fast_ys_v: no visible global function definition
for ‘rcpp_areas_list_to_states_list’
bears_6param_standard_fast_ys_v: no visible global function definition
for ‘read.tree’
bears_6param_standard_fast_ys_v : function_to_optim: no visible global
function definition for ‘rcpp_states_list_to_DEmat’
bears_6param_standard_fast_ys_v: no visible global function definition
for ‘optim’
bears_6param_standard_fast_ys_v: no visible global function definition
for ‘rcpp_states_list_to_DEmat’
bears_9param_standard_fast_ys_v_cb: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
bears_9param_standard_fast_ys_v_cb: no visible global function
definition for ‘read.tree’
bears_9param_standard_fast_ys_v_cb : function_to_optim: no visible
global function definition for ‘rcpp_states_list_to_DEmat’
bears_9param_standard_fast_ys_v_cb: no visible global function
definition for ‘optim’
bears_9param_standard_fast_ys_v_cb: no visible global function
definition for ‘rcpp_states_list_to_DEmat’
bears_optim_run: no visible global function definition for
‘rcpp_areas_list_to_states_list’
bears_optim_run: no visible global function definition for ‘read.tree’
bears_optim_run: no visible global function definition for ‘optim’
bears_optim_run: no visible global function definition for
‘rcpp_states_list_to_DEmat’
calc_loglike_for_optim: no visible global function definition for
‘rcpp_states_list_to_DEmat’
calc_loglike_sp: no visible global function definition for ‘reorder’
calc_loglike_sp: no visible global function definition for ‘mat2coo’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_anclikes_sp_COOprobs’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_anclikes_sp_COOweights_faster’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_rowsums_for_COOweights_columnar’
calc_loglike_sp: no visible global function definition for
‘expokit_dmexpv_Qmat’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_anclikes_sp’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_anclikes_sp_using_COOprobs’
calc_loglike_sp: no visible global function definition for
‘rcpp_calc_splitlikes_using_COOweights_columnar’
calc_loglike_sp: no visible global function definition for
‘expokit_dgpadm_Qmat’
calc_loglike_sp_prebyte: no visible global function definition for
‘reorder’
calc_loglike_sp_prebyte: no visible global function definition for
‘mat2coo’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_anclikes_sp_COOprobs’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_anclikes_sp_COOweights_faster’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_rowsums_for_COOweights_columnar’
calc_loglike_sp_prebyte: no visible global function definition for
‘expokit_dmexpv_Qmat’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_anclikes_sp’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_anclikes_sp_using_COOprobs’
calc_loglike_sp_prebyte: no visible global function definition for
‘rcpp_calc_splitlikes_using_COOweights_columnar’
calc_loglike_sp_prebyte: no visible global function definition for
‘expokit_dgpadm_Qmat’
calc_loglike_sp_stratified: no visible global function definition for
‘rcpp_states_list_to_DEmat’
calc_loglike_sp_stratified: no visible global function definition for
‘read.tree’
calc_loglike_sp_stratified: no visible global function definition for
‘mat2coo’
calc_loglike_sp_stratified: no visible global function definition for
‘rcpp_calc_anclikes_sp_COOweights_faster’
calc_loglike_sp_stratified: no visible global function definition for
‘rcpp_calc_rowsums_for_COOweights_columnar’
calc_loglike_sp_stratified: no visible global function definition for
‘reorder’
calc_prob_forward_onebranch_sparse: no visible global function
definition for ‘expokit_dmexpv_Qmat’
chainsaw2: no visible global function definition for ‘extract.clade’
chainsaw2: no visible global function definition for ‘drop.tip’
check_BioGeoBEARS_run: no visible global function definition for
‘read.tree’
check_BioGeoBEARS_run: no visible global function definition for
‘is.binary.tree’
check_BioGeoBEARS_run: no visible global function definition for
‘numstates_from_numareas’
colors_legend: no visible global function definition for ‘plot’
colors_legend: no visible global function definition for ‘legend’
cornerlabels: no visible global function definition for ‘par’
cornerlabels: no visible global function definition for ‘strwidth’
cornerlabels: no visible global function definition for ‘strheight’
cornerlabels: no visible global function definition for ‘xinch’
cornerlabels: no visible global function definition for ‘yinch’
cornerlabels: no visible global function definition for ‘rect’
cornerpies: no visible global function definition for ‘par’
define_BioGeoBEARS_model_object: no visible global function definition
for ‘new’
define_tipranges_object: no visible global function definition for
‘new’
get_all_daughter_tips_of_a_node: no visible global function definition
for ‘extract.clade’
get_all_node_ages: no visible global function definition for
‘dist.nodes’
get_colors_for_numareas: no visible global function definition for
‘rainbow’
get_colors_for_numareas: no visible global function definition for
‘col2rgb’
get_lagrange_nodenums: no visible global function definition for
‘reorder’
get_node_ages_of_tips: no visible global function definition for
‘dist.nodes’
get_pruningwise_nodenums: no visible global function definition for
‘reorder’
get_statesColors_table: no visible global function definition for
‘rcpp_areas_list_to_states_list’
given_a_starting_state_simulate_branch_end: no visible global function
definition for ‘runif’
given_a_starting_state_simulate_split: no visible global function
definition for ‘rcpp_calc_rowsums_for_COOweights_columnar’
given_a_starting_state_simulate_split: no visible global function
definition for ‘runif’
label_nodes_postorder_phylo3: no visible global function definition for
‘as’
label_nodes_postorder_phylo3: no visible global function definition for
‘reorder’
lrttest: no visible global function definition for ‘pchisq’
map_LG_MLsplits_to_tree: no visible global function definition for
‘par’
map_LG_MLsplits_to_tree: no visible global function definition for
‘plot’
map_LG_MLsplits_to_tree: no visible global function definition for
‘nodelabels’
map_LG_MLsplits_to_tree: no visible global function definition for
‘tiplabels’
map_LG_MLsplits_to_tree: no visible global function definition for
‘title’
map_LG_MLsplits_to_tree: no visible global function definition for
‘axisPhylo’
map_LG_MLsplits_to_tree: no visible global function definition for
‘mtext’
map_LG_MLsplits_to_tree_corners: no visible global function definition
for ‘plot’
map_LG_MLsplits_to_tree_corners: no visible global function definition
for ‘axisPhylo’
map_LG_MLsplits_to_tree_corners: no visible global function definition
for ‘mtext’
map_LG_MLsplits_to_tree_corners: no visible global function definition
for ‘tiplabels’
map_LG_MLstates_to_tree: no visible global function definition for
‘plot’
map_LG_MLstates_to_tree: no visible global function definition for
‘axisPhylo’
map_LG_MLstates_to_tree: no visible global function definition for
‘mtext’
map_LG_MLstates_to_tree: no visible global function definition for
‘nodelabels’
map_LG_MLstates_to_tree: no visible global function definition for
‘tiplabels’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘par’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘plot’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘nodelabels’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘tiplabels’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘title’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘axisPhylo’
map_LGpy_MLsplits_to_tree: no visible global function definition for
‘mtext’
mix_colors_for_states: no visible global function definition for ‘rgb’
nodenums_bottom_up: no visible global function definition for ‘as’
nodenums_bottom_up: no visible global function definition for ‘nNodes’
nodenums_bottom_up: no visible global function definition for ‘nTips’
nodenums_bottom_up: no visible global function definition for ‘nodeId’
parse_lagrange_output: no visible global function definition for
‘write.table’
parse_lagrange_output_old: no visible global function definition for
‘write.table’
parse_lagrange_python_output: no visible global function definition for
‘write.table’
parse_lagrange_python_output_old: no visible global function definition
for ‘write.table’
plot_BioGeoBEARS_model: no visible global function definition for
‘rcpp_areas_list_to_states_list’
plot_BioGeoBEARS_model: no visible global function definition for
‘layout’
plot_BioGeoBEARS_model: no visible global function definition for ‘par’
plot_BioGeoBEARS_model: no visible global function definition for
‘plot’
plot_BioGeoBEARS_model: no visible global function definition for
‘text’
plot_BioGeoBEARS_model: no visible global function definition for
‘title’
plot_BioGeoBEARS_model: no visible global function definition for
‘barplot’
plot_BioGeoBEARS_model: no visible global function definition for
‘axis’
plot_BioGeoBEARS_model: no visible global function definition for
‘mtext’
plot_BioGeoBEARS_results: no visible global function definition for
‘read.tree’
plot_BioGeoBEARS_results: no visible global function definition for
‘reorder’
plot_BioGeoBEARS_results: no visible global function definition for
‘numstates_from_numareas’
plot_BioGeoBEARS_results: no visible global function definition for
‘rcpp_areas_list_to_states_list’
plot_BioGeoBEARS_results: no visible global function definition for
‘plot’
plot_BioGeoBEARS_results: no visible global function definition for
‘tiplabels’
plot_BioGeoBEARS_results: no visible global function definition for
‘axisPhylo’
plot_BioGeoBEARS_results: no visible global function definition for
‘mtext’
plot_BioGeoBEARS_results: no visible global function definition for
‘nodelabels’
plot_BioGeoBEARS_results: no visible global function definition for
‘title’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘rcpp_areas_list_to_states_list’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘par’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘plot’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘title’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘barplot’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘axis’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘mtext’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘text’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘rcpp_calc_anclikes_sp_COOweights_faster’
plot_cladogenesis_size_probabilities: no visible global function
definition for ‘rcpp_calc_rowsums_for_COOweights_columnar’
postorder_nodes_phylo4_return_table: no visible global function
definition for ‘is’
postorder_nodes_phylo4_return_table: no visible global function
definition for ‘as’
postorder_nodes_phylo4_return_table: no visible global function
definition for ‘nodeId’
postorder_nodes_phylo4_return_table: no visible global function
definition for ‘descendants’
postorder_nodes_phylo4_return_table: no visible global function
definition for ‘reorder’
prune_specimens_to_species: no visible global function definition for
‘plot’
prune_specimens_to_species: no visible global function definition for
‘axisPhylo’
prune_specimens_to_species: no visible global function definition for
‘title’
prune_specimens_to_species: no visible global function definition for
‘drop.tip’
prune_specimens_to_species: no visible global function definition for
‘is.ultrametric’
read_controls: no visible global function definition for ‘read.table’
read_detections: no visible global function definition for ‘read.table’
readfiles_BioGeoBEARS_run: no visible global function definition for
‘read.tree’
relative_probabilities_of_subsets: no visible global function
definition for ‘quantile’
relative_probabilities_of_vicariants: no visible global function
definition for ‘median’
relative_probabilities_of_vicariants: no visible global function
definition for ‘quantile’
save_tipranges_to_LagrangePHYLIP: no visible global function definition
for ‘write.table’
section_the_tree: no visible global function definition for ‘read.tree’
section_the_tree: no visible global function definition for ‘plot’
section_the_tree: no visible global function definition for ‘axisPhylo’
simulate_biogeog_history: no visible global function definition for
‘reorder’
simulated_indexes_to_tipranges_object: no visible global function
definition for ‘read.tree’
simulated_indexes_to_tipranges_object: no visible global function
definition for ‘reorder’
traverse_up: no visible global function definition for ‘children’
Undefined global functions or variables:
.PlotPhyloEnv as axis axisPhylo barplot children col2rgb descendants
dist.nodes drop.tip expokit_dgpadm_Qmat expokit_dmexpv_Qmat
extract.clade is is.binary.tree is.ultrametric layout legend mat2coo
median mtext nNodes nTips new nodeId nodelabels
numstates_from_numareas optim par pchisq plot quantile rainbow
rcpp_areas_list_to_states_list rcpp_calc_anclikes_sp
rcpp_calc_anclikes_sp_COOprobs
rcpp_calc_anclikes_sp_COOweights_faster
rcpp_calc_anclikes_sp_using_COOprobs
rcpp_calc_rowsums_for_COOweights_columnar
rcpp_calc_splitlikes_using_COOweights_columnar
rcpp_states_list_to_DEmat read.table read.tree rect reorder rgb runif
strheight strwidth text tiplabels title write.table xinch yinch
Consider adding
importFrom("grDevices", "col2rgb", "rainbow", "rgb")
importFrom("graphics", "axis", "barplot", "layout", "legend", "mtext",
"par", "plot", "rect", "strheight", "strwidth", "text",
"title", "xinch", "yinch")
importFrom("methods", "as", "is", "new")
importFrom("stats", "median", "optim", "pchisq", "quantile", "reorder",
"runif")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64