Last updated on 2019-03-17 07:46:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 6.85 | 54.74 | 61.59 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 5.25 | 43.82 | 49.07 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 74.60 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 72.33 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.1.0 | 17.00 | 67.00 | 84.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 5.04 | 52.99 | 58.03 | OK | |
| r-patched-solaris-x86 | 0.1.0 | 122.80 | OK | |||
| r-release-linux-x86_64 | 0.1.0 | 4.55 | 52.71 | 57.26 | OK | |
| r-release-windows-ix86+x86_64 | 0.1.0 | 15.00 | 63.00 | 78.00 | OK | |
| r-release-osx-x86_64 | 0.1.0 | OK | ||||
| r-oldrel-osx-x86_64 | 0.1.0 | ERROR |
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in 'icsurvROC-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: icsurvROC
> ### Title: Interval Censored survival ROC
> ### Aliases: icsurvROC
> ### Keywords: Semiparametric Cox proportional hazards, local NPMLE, maximum
> ### likelihood croos validation
>
> ### ** Examples
>
> Time= c(1,2,5,3,9,8,9,4,6,4)
> Status= c(1,1,1,0,1,1,1,0,0,0)
> Marker= c(8,2,6,3,1,4,5,1,3,7)
>
> #np at year 3
> nobs=length(Time)
> span=sd(Marker)*nobs^(-1/7)
> RES1=icsurvROC(Time, Status, Marker, pred.time=3, method="np", span=span)
> print(RES1)
$tpf
[1] 1.0000000 0.8264495 0.7402257 0.5663736 0.4751137 0.3892563 0.2863814
[8] 0.1562429 0.0000000 0.0000000
$fpf
[1] 1.00000000 0.78620335 0.67901738 0.46537808 0.36081908 0.25344200
[7] 0.15494160 0.07066247 0.00000000 0.00000000
$cut.value
[1] -Inf 1 2 3 4 5 6 7 8 Inf
$auc
[1] 0.5770804
$eval.time
[1] 3
>
> #sp at year 3
> RES2=icsurvROC(Time, Status, Marker, pred.time=3, method="sp")
[1] "Proportional hazards model does not converge"
Error in if (St != 1) tpf.a[i] = (1 - Fc - Sct)/(1 - St) :
missing value where TRUE/FALSE needed
Calls: icsurvROC -> icROC
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘icsurvROC-Ex.R’ failed
The error most likely occurred in:
> ### Name: icsurvROC
> ### Title: Interval Censored survival ROC
> ### Aliases: icsurvROC
> ### Keywords: Semiparametric Cox proportional hazards, local NPMLE, maximum
> ### likelihood croos validation
>
> ### ** Examples
>
> Time= c(1,2,5,3,9,8,9,4,6,4)
> Status= c(1,1,1,0,1,1,1,0,0,0)
> Marker= c(8,2,6,3,1,4,5,1,3,7)
>
> #np at year 3
> nobs=length(Time)
> span=sd(Marker)*nobs^(-1/7)
> RES1=icsurvROC(Time, Status, Marker, pred.time=3, method="np", span=span)
> print(RES1)
$tpf
[1] 1.0000000 0.8264495 0.7402257 0.5663736 0.4751137 0.3892563 0.2863814
[8] 0.1562429 0.0000000 0.0000000
$fpf
[1] 1.00000000 0.78620335 0.67901738 0.46537808 0.36081908 0.25344200
[7] 0.15494160 0.07066247 0.00000000 0.00000000
$cut.value
[1] -Inf 1 2 3 4 5 6 7 8 Inf
$auc
[1] 0.5770804
$eval.time
[1] 3
>
> #sp at year 3
> RES2=icsurvROC(Time, Status, Marker, pred.time=3, method="sp")
[1] "Proportional hazards model does not converge"
Error in if (St != 1) tpf.a[i] = (1 - Fc - Sct)/(1 - St) :
missing value where TRUE/FALSE needed
Calls: icsurvROC -> icROC
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64
Version: 0.1.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-oldrel-osx-x86_64