CRAN Package Check Results for Package lmeVarComp

Last updated on 2021-05-27 12:54:16 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1 5.09 25.88 30.97 ERROR
r-devel-linux-x86_64-debian-gcc 1.1 2.94 20.08 23.02 ERROR
r-devel-linux-x86_64-fedora-clang 1.1 47.82 ERROR
r-devel-linux-x86_64-fedora-gcc 1.1 36.89 ERROR
r-devel-windows-x86_64 1.1 9.00 42.00 51.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.1 OK
r-patched-linux-x86_64 1.1 3.91 25.93 29.84 OK
r-patched-solaris-x86 1.1 54.40 OK
r-release-linux-x86_64 1.1 3.90 25.89 29.79 OK
r-release-windows-ix86+x86_64 1.1 13.00 39.00 52.00 OK
r-oldrel-macos-x86_64 1.1 OK
r-oldrel-windows-ix86+x86_64 1.1 13.00 41.00 54.00 OK

Check Details

Version: 1.1
Check: examples
Result: ERROR
    Running examples in 'lmeVarComp-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: rlr.test
    > ### Title: Restricted Likelihood Ratio Test and Generalized F-test for Zero
    > ### Variance Components
    > ### Aliases: rlr.test
    >
    > ### ** Examples
    >
    > # two-way random effects ANOVA
    > n1 <- 5L
    > n2 <- 6L
    > n0 <- 4L
    > n <- n1 * n2 * n0
    > X <- cbind(rep(1, n))
    > A <- gl(n1, n2 * n0)
    > Z1 <- model.matrix(~ -1 + A, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + A, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > B <- rep(gl(n2, n0), n1)
    > Z2 <- model.matrix(~ -1 + B, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + B, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > Z3 <- model.matrix(~ -1 + B : A, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + B:A, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > set.seed(1L)
    > Y <- (X %*% 1
    + + Z1 %*% rnorm(ncol(Z1), 0, 0.7)
    + + Z2 %*% rnorm(ncol(Z2), 0, 0.3)
    + + Z3 %*% rnorm(ncol(Z3), 0, 0.5)
    + + rnorm(n, 0, 1))
    > Z <- list(Z1, Z2, Z3)
    > Sigma <- lapply(Z, function(z) diag(ncol(z)))
    > # tests interaction effects
    > rlr.test(Y, X, Z, Sigma, 2L, 2000L, 2L)
    Error in matrix(A, p, p) :
     data length differs from size of matrix: [42483 != 119 x 119]
    Calls: rlr.test -> diagonalize -> matrix
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.1
Check: examples
Result: ERROR
    Running examples in ‘lmeVarComp-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: rlr.test
    > ### Title: Restricted Likelihood Ratio Test and Generalized F-test for Zero
    > ### Variance Components
    > ### Aliases: rlr.test
    >
    > ### ** Examples
    >
    > # two-way random effects ANOVA
    > n1 <- 5L
    > n2 <- 6L
    > n0 <- 4L
    > n <- n1 * n2 * n0
    > X <- cbind(rep(1, n))
    > A <- gl(n1, n2 * n0)
    > Z1 <- model.matrix(~ -1 + A, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + A, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > B <- rep(gl(n2, n0), n1)
    > Z2 <- model.matrix(~ -1 + B, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + B, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > Z3 <- model.matrix(~ -1 + B : A, contrasts.arg = contr.treatment)
    Warning in model.matrix.default(~-1 + B:A, contrasts.arg = contr.treatment) :
     non-list contrasts argument ignored
    > set.seed(1L)
    > Y <- (X %*% 1
    + + Z1 %*% rnorm(ncol(Z1), 0, 0.7)
    + + Z2 %*% rnorm(ncol(Z2), 0, 0.3)
    + + Z3 %*% rnorm(ncol(Z3), 0, 0.5)
    + + rnorm(n, 0, 1))
    > Z <- list(Z1, Z2, Z3)
    > Sigma <- lapply(Z, function(z) diag(ncol(z)))
    > # tests interaction effects
    > rlr.test(Y, X, Z, Sigma, 2L, 2000L, 2L)
    Error in matrix(A, p, p) :
     data length differs from size of matrix: [42483 != 119 x 119]
    Calls: rlr.test -> diagonalize -> matrix
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc