Last updated on 2021-11-17 06:48:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9.9 | 15.79 | 276.02 | 291.81 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.9.9 | 17.24 | 215.43 | 232.67 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 0.9.9 | 352.45 | WARN | |||
| r-devel-linux-x86_64-fedora-gcc | 0.9.9 | 345.73 | WARN | |||
| r-devel-windows-x86_64 | 0.9.9 | 23.00 | 263.00 | 286.00 | NOTE | |
| r-devel-windows-x86_64-gcc10-UCRT | 0.9.9 | NOTE | ||||
| r-patched-linux-x86_64 | 0.9.9 | 12.43 | 238.56 | 250.99 | WARN | |
| r-patched-solaris-x86 | 0.9.9 | 427.70 | WARN | |||
| r-release-linux-x86_64 | 0.9.9 | 16.64 | 247.00 | 263.64 | NOTE | |
| r-release-macos-arm64 | 0.9.9 | NOTE | ||||
| r-release-macos-x86_64 | 0.9.9 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 0.9.9 | 33.00 | 303.00 | 336.00 | NOTE | |
| r-oldrel-macos-x86_64 | 0.9.9 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.9.9 | 24.00 | 262.00 | 286.00 | NOTE |
Version: 0.9.9
Check: R code for possible problems
Result: NOTE
GOpredict: no visible global function definition for 'fisher.test'
KEGGpredict: no visible global function definition for 'fisher.test'
ProteinCluster: no visible global function definition for 'ecdf'
ProteinCluster: no visible global function definition for 'as.hclust'
ProteinCluster: no visible global function definition for
'as.dendrogram'
ProteinCluster : addE: no visible global function definition for
'is.leaf'
SignificantSubcluster: no visible global function definition for
'order.dendrogram'
SignificantSubcluster: no visible global function definition for
'fisher.test'
Undefined global functions or variables:
as.dendrogram as.hclust ecdf fisher.test is.leaf order.dendrogram
Consider adding
importFrom("stats", "as.dendrogram", "as.hclust", "ecdf",
"fisher.test", "is.leaf", "order.dendrogram")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.9.9
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'PANDA.Rnw' using Sweave
Error: processing vignette 'PANDA.Rnw' failed with diagnostics:
chunk 6
Error in GOpredict(Pfile = OrderAll, PPIdb = dfPPI, Gene2Annotation = GENE2GOtopLite, :
trying to get slot "Term" from an object of a basic class ("NULL") with no slots
--- failed re-building 'PANDA.Rnw'
SUMMARY: processing the following file failed:
'PANDA.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86
Version: 0.9.9
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘PANDA.Rnw’ using Sweave
Error: processing vignette 'PANDA.Rnw' failed with diagnostics:
chunk 6
Error in GOpredict(Pfile = OrderAll, PPIdb = dfPPI, Gene2Annotation = GENE2GOtopLite, :
trying to get slot "Term" from an object of a basic class ("NULL") with no slots
--- failed re-building ‘PANDA.Rnw’
SUMMARY: processing the following file failed:
‘PANDA.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.9.9
Check: package dependencies
Result: ERROR
Package required but not available: ‘GO.db’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-macos-x86_64