CRAN Package Check Results for Package GPrank

Last updated on 2022-03-18 06:48:44 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.4 13.53 137.96 151.49 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.4 10.15 101.33 111.48 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.4 185.24 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.4 168.94 ERROR
r-devel-windows-x86_64-new-UL 0.1.4 32.00 145.00 177.00 ERROR
r-devel-windows-x86_64-new-TK 0.1.4 ERROR
r-patched-linux-x86_64 0.1.4 12.76 153.94 166.70 NOTE
r-release-linux-x86_64 0.1.4 10.97 154.58 165.55 NOTE
r-release-macos-arm64 0.1.4 OK
r-release-macos-x86_64 0.1.4 OK
r-release-windows-ix86+x86_64 0.1.4 31.00 185.00 216.00 OK
r-oldrel-macos-x86_64 0.1.4 OK
r-oldrel-windows-ix86+x86_64 0.1.4 32.00 183.00 215.00 OK

Check Details

Version: 0.1.4
Check: examples
Result: ERROR
    Running examples in 'GPrank-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: apply_gpTest
    > ### Title: Performing Gaussian process test
    > ### Aliases: apply_gpTest
    > ### Keywords: Bayes factor model,
    >
    > ### ** Examples
    >
    > x=as.matrix(seq(1,10))
    > y=as.matrix(sin(x))
    > v=as.matrix(runif(10,0,0.5))
    > nullModelKernelTypes=c("white","fixedvariance")
    > modelKernelTypes=c("rbf","white","fixedvariance")
    > test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
    Error in if (class(invCh) == "try-error") { :
     the condition has length > 1
    Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.4
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
     ...
    --- re-building 'GPrank.Rmd' using rmarkdown
    Quitting from lines 96-101 (GPrank.Rmd)
    Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
    the condition has length > 1
    --- failed re-building 'GPrank.Rmd'
    
    SUMMARY: processing the following file failed:
     'GPrank.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.1.4
Check: examples
Result: ERROR
    Running examples in ‘GPrank-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: apply_gpTest
    > ### Title: Performing Gaussian process test
    > ### Aliases: apply_gpTest
    > ### Keywords: Bayes factor model,
    >
    > ### ** Examples
    >
    > x=as.matrix(seq(1,10))
    > y=as.matrix(sin(x))
    > v=as.matrix(runif(10,0,0.5))
    > nullModelKernelTypes=c("white","fixedvariance")
    > modelKernelTypes=c("rbf","white","fixedvariance")
    > test_result=apply_gpTest(x,y,v,nullModelKernelTypes,modelKernelTypes,y_fitted=TRUE)
    Error in if (class(invCh) == "try-error") { :
     the condition has length > 1
    Calls: apply_gpTest ... gpCreate -> gpExpandParam -> gpUpdateKernels -> .jitCholInv
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK

Version: 0.1.4
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘GPrank.Rmd’ using rmarkdown
    Quitting from lines 96-101 (GPrank.Rmd)
    Error: processing vignette 'GPrank.Rmd' failed with diagnostics:
    the condition has length > 1
    --- failed re-building ‘GPrank.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘GPrank.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK

Version: 0.1.4
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     ‘geneA_GPprofile.pdf’ ‘geneA_abstr.png’ ‘geneA_gene.png’
     ‘geneA_reltr.png’ ‘geneB_abstr.png’ ‘geneB_gene.png’
     ‘geneB_reltr.png’ ‘geneC_abstr.png’ ‘geneC_gene.png’
     ‘geneC_reltr.png’ ‘testdb.sqlite’
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64