CRAN Package Check Results for Package cusp

Last updated on 2022-04-27 11:53:53 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.3.3 5.21 95.68 100.89 NOTE
r-devel-linux-x86_64-debian-gcc 2.3.3 4.77 69.69 74.46 NOTE
r-devel-linux-x86_64-fedora-clang 2.3.3 124.50 ERROR
r-devel-linux-x86_64-fedora-gcc 2.3.3 126.15 ERROR
r-devel-windows-x86_64 2.3.3 36.00 170.00 206.00 NOTE
r-patched-linux-x86_64 2.3.3 6.96 97.69 104.65 OK
r-release-linux-x86_64 2.3.3 5.98 98.29 104.27 OK
r-release-macos-arm64 2.3.3 45.00 NOTE
r-release-macos-x86_64 2.3.3 75.00 OK
r-release-windows-x86_64 2.3.3 26.00 172.00 198.00 OK
r-oldrel-macos-arm64 2.3.3 67.00 OK
r-oldrel-macos-x86_64 2.3.3 98.00 OK
r-oldrel-windows-ix86+x86_64 2.3.3 11.00 175.00 186.00 OK

Check Details

Version: 2.3.3
Check: Rd files
Result: NOTE
    checkRd: (7) zeeman.Rd:40: \item in \describe must have non-empty label
    checkRd: (7) zeeman.Rd:41: \item in \describe must have non-empty label
    checkRd: (7) zeeman.Rd:42: \item in \describe must have non-empty label
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 2.3.3
Check: compiled code
Result: NOTE
    File ‘cusp/libs/cusp.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.3.3
Check: examples
Result: ERROR
    Running examples in ‘cusp-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: predict.cusp
    > ### Title: Predict method for Cusp Model Fits
    > ### Aliases: predict.cusp
    >
    > ### ** Examples
    >
    > set.seed(123)
    > # example with regressors
    > x1 = runif(150)
    > x2 = runif(150)
    > z = Vectorize(rcusp)(1, 4*x1-2, 4*x2-1)
    > data <- data.frame(x1, x2, z)
    > fit <- cusp(y ~ z, alpha ~ x1+x2, beta ~ x1+x2, data)
    >
    > newdata = data.frame(x1 = runif(10), x2 = runif(10), z = 0)
    > predict(fit, newdata)
    Error in se.fit || interval != "none" :
     'length = 3' in coercion to 'logical(1)'
    Calls: predict -> predict.cusp
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 2.3.3
Check: re-building of vignette outputs
Result: NOTE
    Error(s) in re-building vignettes:
    --- re-building ‘Cusp-JSS.Rnw’ using Sweave
    --- finished re-building ‘Cusp-JSS.Rnw’
    
    --- re-building ‘cusp-hands-on-examples.Rnw’ using Sweave
    Warning in model.matrix.default(mt, mf, contrasts) :
     non-list contrasts argument ignored
    Warning in model.matrix.default(mta, mfa, contrasts) :
     non-list contrasts argument ignored
    Warning in model.matrix.default(mtb, mfb, contrasts) :
     non-list contrasts argument ignored
    Loading required package: plot3D
    tcltk DLL is linked to '/opt/R/arm64/lib/libtk8.6.dylib'
    Error: package or namespace load failed for ‘plot3D’:
     .onLoad failed in loadNamespace() for 'tcltk', details:
     call: fun(libname, pkgname)
     error: Tcl/Tk libraries are missing: install the Tcl/Tk component from the R installer
    Loading required package: plot3D
    tcltk DLL is linked to '/opt/R/arm64/lib/libtk8.6.dylib'
    Error: package or namespace load failed for ‘plot3D’:
     .onLoad failed in loadNamespace() for 'tcltk', details:
     call: fun(libname, pkgname)
     error: Tcl/Tk libraries are missing: install the Tcl/Tk component from the R installer
    Error: processing vignette 'cusp-hands-on-examples.Rnw' failed with diagnostics:
    Running 'texi2dvi' on 'cusp-hands-on-examples.tex' failed.
    LaTeX errors:
    !pdfTeX error: pdflatex (file /Volumes/Builds/packages/big-sur-arm64/results/4.
    2/cusp.Rcheck/vign_test/cusp/vignettes/cusp-hands-on-examples-fig1.pdf): PDF in
    clusion: required page does not exist <0>
     ==> Fatal error occurred, no output PDF file produced!
    --- failed re-building ‘cusp-hands-on-examples.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘cusp-hands-on-examples.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-arm64