CRAN Package Check Results for Package ppmlasso

Last updated on 2022-11-23 07:54:14 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 19.21 202.76 221.97 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 14.31 111.63 125.94 ERROR
r-devel-linux-x86_64-fedora-clang 1.2 230.01 ERROR
r-devel-linux-x86_64-fedora-gcc 1.2 203.13 ERROR
r-devel-windows-x86_64 1.2 29.00 167.00 196.00 ERROR
r-patched-linux-x86_64 1.2 14.77 136.82 151.59 ERROR
r-release-linux-x86_64 1.2 14.15 135.45 149.60 ERROR
r-release-macos-arm64 1.2 58.00 OK
r-release-macos-x86_64 1.2 101.00 OK
r-release-windows-x86_64 1.2 33.00 169.00 202.00 ERROR
r-oldrel-macos-arm64 1.2 56.00 OK
r-oldrel-macos-x86_64 1.2 82.00 OK
r-oldrel-windows-ix86+x86_64 1.2 36.00 158.00 194.00 ERROR

Check Details

Version: 1.2
Check: Rd files
Result: NOTE
    checkRd: (-1) findRes.Rd:28: Escaped LaTeX specials: \&
    checkRd: (-1) ppmlasso-package.Rd:42: Escaped LaTeX specials: \&
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.2
Check: examples
Result: ERROR
    Running examples in ‘ppmlasso-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: envelope.ppmlasso
    > ### Title: Calculates simulation envelopes for goodness-of-fit
    > ### Aliases: envelope.ppmlasso
    >
    > ### ** Examples
    >
    > data(BlueMountains)
    > sub.env = BlueMountains$env[BlueMountains$env$Y > 6270 & BlueMountains$env$X > 300,]
    > sub.euc = BlueMountains$eucalypt[BlueMountains$eucalypt$Y > 6270 & BlueMountains$eucalypt$X > 300,]
    > ppm.form = ~poly(FC, TMP_MIN, TMP_MAX, RAIN_ANN, degree = 2) + poly(D_MAIN_RDS, D_URBAN, degree = 2)
    > ppm.fit = ppmlasso(ppm.form, sp.xy = sub.euc, env.grid = sub.env, sp.scale = 1, n.fits = 20,
    + writefile = FALSE)
    Calculating species environmental data for variable: FC
    Calculating species environmental data for variable: D_MAIN_RDS
    Calculating species environmental data for variable: D_URBAN
    Calculating species environmental data for variable: RAIN_ANN
    Calculating species environmental data for variable: TMP_MAX
    Calculating species environmental data for variable: TMP_MIN
    Fitting Models: 1 of 20
    Fitting Models: 2 of 20
    Fitting Models: 3 of 20
    Fitting Models: 4 of 20
    Fitting Models: 5 of 20
    Fitting Models: 6 of 20
    Fitting Models: 7 of 20
    Fitting Models: 8 of 20
    Fitting Models: 9 of 20
    Fitting Models: 10 of 20
    Fitting Models: 11 of 20
    Fitting Models: 12 of 20
    Fitting Models: 13 of 20
    Fitting Models: 14 of 20
    Fitting Models: 15 of 20
    Fitting Models: 16 of 20
    Fitting Models: 17 of 20
    Fitting Models: 18 of 20
    Fitting Models: 19 of 20
    Fitting Models: 20 of 20
    > envelope(ppm.fit, Kinhom, nsim = 20)
    Error in UseMethod("envelope") :
     no applicable method for 'envelope' applied to an object of class "c('ppmlasso', 'list')"
    Calls: envelope
    Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Check: examples
Result: ERROR
    Running examples in ‘ppmlasso-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: envelope.ppmlasso
    > ### Title: Calculates simulation envelopes for goodness-of-fit
    > ### Aliases: envelope.ppmlasso
    >
    > ### ** Examples
    >
    > data(BlueMountains)
    > sub.env = BlueMountains$env[BlueMountains$env$Y > 6270 & BlueMountains$env$X > 300,]
    > sub.euc = BlueMountains$eucalypt[BlueMountains$eucalypt$Y > 6270 & BlueMountains$eucalypt$X > 300,]
    > ppm.form = ~poly(FC, TMP_MIN, TMP_MAX, RAIN_ANN, degree = 2) + poly(D_MAIN_RDS, D_URBAN, degree = 2)
    > ppm.fit = ppmlasso(ppm.form, sp.xy = sub.euc, env.grid = sub.env, sp.scale = 1, n.fits = 20,
    + writefile = FALSE)
    Calculating species environmental data for variable: FC
    Calculating species environmental data for variable: D_MAIN_RDS
    Calculating species environmental data for variable: D_URBAN
    Calculating species environmental data for variable: RAIN_ANN
    Calculating species environmental data for variable: TMP_MAX
    Calculating species environmental data for variable: TMP_MIN
    Fitting Models: 1 of 20
    Fitting Models: 2 of 20
    Fitting Models: 3 of 20
    Fitting Models: 4 of 20
    Fitting Models: 5 of 20
    Fitting Models: 6 of 20
    Fitting Models: 7 of 20
    Fitting Models: 8 of 20
    Fitting Models: 9 of 20
    Fitting Models: 10 of 20
    Fitting Models: 11 of 20
    Fitting Models: 12 of 20
    Fitting Models: 13 of 20
    Fitting Models: 14 of 20
    Fitting Models: 15 of 20
    Fitting Models: 16 of 20
    Fitting Models: 17 of 20
    Fitting Models: 18 of 20
    Fitting Models: 19 of 20
    Fitting Models: 20 of 20
    > envelope(ppm.fit, Kinhom, nsim = 20)
    Error in UseMethod("envelope") :
     no applicable method for 'envelope' applied to an object of class "c('ppmlasso', 'list')"
    Calls: envelope
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-ix86+x86_64