CRAN Package Check Results for Package ANTs

Last updated on 2023-09-26 14:04:50 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.0.16 791.96 166.95 958.91 ERROR
r-devel-linux-x86_64-debian-gcc 0.0.16 535.99 128.17 664.16 ERROR
r-devel-linux-x86_64-fedora-clang 0.0.16 1660.91 ERROR
r-devel-linux-x86_64-fedora-gcc 0.0.16 1516.84 ERROR
r-devel-windows-x86_64 0.0.16 576.00 182.00 758.00 ERROR
r-patched-linux-x86_64 0.0.16 638.89 166.47 805.36 NOTE
r-release-linux-x86_64 0.0.16 574.38 145.79 720.17 NOTE
r-release-macos-arm64 0.0.16 308.00 NOTE
r-release-macos-x86_64 0.0.16 530.00 NOTE
r-release-windows-x86_64 0.0.16 750.00 223.00 973.00 NOTE
r-oldrel-macos-arm64 0.0.16 224.00 NOTE
r-oldrel-macos-x86_64 0.0.16 345.00 NOTE
r-oldrel-windows-x86_64 0.0.16 738.00 195.00 933.00 OK

Check Details

Version: 0.0.16
Check: C++ specification
Result: NOTE
     Specified C++11: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 0.0.16
Check: Rd \usage sections
Result: NOTE
    Documented arguments not in \usage in documentation object 'assoc_mat':
     ‘Mfbi’
    
    Documented arguments not in \usage in documentation object 'assoc_mat_full':
     ‘Mfbi’
    
    Documented arguments not in \usage in documentation object 'assoc_mat_one_id':
     ‘Mfbi’
    
    Documented arguments not in \usage in documentation object 'df.to.gbi.focal':
     ‘scan’ ‘id’
    
    Documented arguments not in \usage in documentation object 'list_to_df':
     ‘lst’
    
    Documented arguments not in \usage in documentation object 'mat_row_extract':
     ‘int’
    
    Documented arguments not in \usage in documentation object 'mat_rows_sums':
     ‘m’
    
    Documented arguments not in \usage in documentation object 'mat_rows_sumsBinary':
     ‘m’
    
    Documented arguments not in \usage in documentation object 'met.disparity.single':
     ‘directed’
    
    Documented arguments not in \usage in documentation object 'perm.dataStream.focal':
     ‘id’
    
    Documented arguments not in \usage in documentation object 'perm_vec_factor':
     ‘x’ ‘progress’
    
    Documented arguments not in \usage in documentation object 'perm_vec_int':
     ‘perm’
    
    Documented arguments not in \usage in documentation object 'redo_perm_dataStream1_focal':
     ‘progress’
    
    Documented arguments not in \usage in documentation object 'redo_perm_dataStream_ControlFactor_scd':
     ‘CumSizesGbis’
    
    Documented arguments not in \usage in documentation object 'redo_perm_dataStream_focal':
     ‘ldf2’ ‘id_obs’
    
    Documented arguments not in \usage in documentation object 'stat.ci':
     ‘conf.level’
    
    Documented arguments not in \usage in documentation object 'stat.model.diag':
     ‘formula’
    
    Documented arguments not in \usage in documentation object 'stat.p':
     ‘histogram’
    
    Documented arguments not in \usage in documentation object 'vec_to_mat':
     ‘n’
    
    Documented arguments not in \usage in documentation object 'vec_to_mat_add_diag':
     ‘n’
    
    Functions with \usage entries need to have the appropriate \alias
    entries, and all their arguments documented.
    The \usage entries must correspond to syntactically valid R code.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.0.16
Check: examples
Result: ERROR
    Running examples in ‘ANTs-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: stat.t
    > ### Title: T-test on data frame
    > ### Aliases: stat.t
    >
    > ### ** Examples
    >
    > t=met.strength(sim.m,sim.df,1) # Computing network metric
    > t=perm.net.nl(t,labels='sex',rf=NULL,nperm=10,progress=FALSE) # Node label permutations
    > r.t=stat.t(t,formula = strength ~ sex,progress=FALSE) # Permuted t-test
    Error in t.test.formula(formula, data = obs, na.action = , mu = mu, paired = paired, :
     cannot use 'paired' in formula method
    Calls: stat.t -> t.test -> t.test.formula
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.0.16
Check: examples
Result: ERROR
    Running examples in ‘ANTs-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: stat.t
    > ### Title: T-test on data frame
    > ### Aliases: stat.t
    >
    > ### ** Examples
    >
    > t=met.strength(sim.m,sim.df,1) # Computing network metric
    > t=perm.net.nl(t,labels='sex',rf=NULL,nperm=10,progress=FALSE) # Node label permutations
    > r.t=stat.t(t,formula = strength ~ sex,progress=FALSE) # Permuted t-test
    Error in t.test.formula(formula, data = obs, na.action = , mu = mu, paired = paired, :
     cannot use 'paired' in formula method
    Calls: stat.t -> t.test -> t.test.formula
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.0.16
Check: installed package size
Result: NOTE
     installed size is 16.2Mb
     sub-directories of 1Mb or more:
     libs 14.0Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64