Last updated on 2023-10-06 07:57:12 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.5 | 3.12 | 51.23 | 54.35 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.5 | 3.28 | 39.10 | 42.38 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.5 | 69.86 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.5 | 77.90 | ERROR | |||
| r-devel-windows-x86_64 | 0.1.5 | 6.00 | 63.00 | 69.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.5 | 4.86 | 48.75 | 53.61 | ERROR | |
| r-release-linux-x86_64 | 0.1.5 | 4.51 | 49.58 | 54.09 | ERROR | |
| r-release-macos-arm64 | 0.1.5 | 42.00 | ERROR | |||
| r-release-macos-x86_64 | 0.1.5 | 60.00 | ERROR | |||
| r-release-windows-x86_64 | 0.1.5 | 7.00 | 68.00 | 75.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.5 | 34.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 0.1.5 | 52.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 0.1.5 | 7.00 | 67.00 | 74.00 | ERROR |
Version: 0.1.5
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘r2cytoscape’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 0.1.5
Check: dependencies in R code
Result: WARN
Missing or unexported objects:
‘gRbase::M2graphNEL’ ‘gRbase::graphNEL2M’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.1.5
Check: examples
Result: ERROR
Running examples in ‘SourceSet-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ripAllRootsClique
> ### Title: All possible RIP orderings
> ### Aliases: ripAllRootsClique
>
> ### ** Examples
>
> if(require(gRbase)){
+
+ ## decomposable graph
+ ug.graph<-ug(~1:2:3+3:4+4:5:6:7)
+ ug.rip.all<-ripAllRootsClique(ug.graph)
+ # 7 variables
+ length(ug.rip.all$elements$variables)
+ # 3 max.cliques
+ length(ug.rip.all$elements$cliques)
+ # 7 unique components
+ nrow(ug.rip.all$elements$components)
+ # all rip orderings:
+ ug.rip.all$indices$ordering
+
+ ## directed graph
+ dag.graph<-dag(~3:1+3:2+4:3)
+ dag.rip.all<-ripAllRootsClique(dag.graph)
+ # triangulated and morliazed graph
+ dag.rip.all$graph
+ # all rip orderings
+ dag.rip.all$indices$ordering
+ }
Loading required package: gRbase
Error in ripAllRootsClique(ug.graph) :
graph argument is not a graphNEL object
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SourceSet.Rmd’ using rmarkdown
Quitting from lines 151-158 [unnamed-chunk-5] (SourceSet.Rmd)
Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
Input must be a matrix or a dgCMatrix
--- failed re-building ‘SourceSet.Rmd’
SUMMARY: processing the following file failed:
‘SourceSet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1.5
Check: examples
Result: ERROR
Running examples in ‘SourceSet-Ex.R’ failed
The error most likely occurred in:
> ### Name: ripAllRootsClique
> ### Title: All possible RIP orderings
> ### Aliases: ripAllRootsClique
>
> ### ** Examples
>
> if(require(gRbase)){
+
+ ## decomposable graph
+ ug.graph<-ug(~1:2:3+3:4+4:5:6:7)
+ ug.rip.all<-ripAllRootsClique(ug.graph)
+ # 7 variables
+ length(ug.rip.all$elements$variables)
+ # 3 max.cliques
+ length(ug.rip.all$elements$cliques)
+ # 7 unique components
+ nrow(ug.rip.all$elements$components)
+ # all rip orderings:
+ ug.rip.all$indices$ordering
+
+ ## directed graph
+ dag.graph<-dag(~3:1+3:2+4:3)
+ dag.rip.all<-ripAllRootsClique(dag.graph)
+ # triangulated and morliazed graph
+ dag.rip.all$graph
+ # all rip orderings
+ dag.rip.all$indices$ordering
+ }
Loading required package: gRbase
Error in ripAllRootsClique(ug.graph) :
graph argument is not a graphNEL object
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘SourceSet.Rmd’ using rmarkdown
Quitting from lines 151-158 [unnamed-chunk-5] (SourceSet.Rmd)
Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
Input must be a matrix or a dgCMatrix
--- failed re-building ‘SourceSet.Rmd’
SUMMARY: processing the following file failed:
‘SourceSet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.1.5
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'r2cytoscape', 'hgu95av2.db'
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64
Version: 0.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SourceSet.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'hgu95av2.db''
Quitting from lines 512-527 (SourceSet.Rmd)
Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'as.list': object 'org.Hs.egSYMBOL' not found
--- failed re-building ‘SourceSet.Rmd’
SUMMARY: processing the following file failed:
‘SourceSet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SourceSet.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
Failed with error: 'there is no package called 'hgu95av2.db''
Quitting from lines 512-527 (SourceSet.Rmd)
Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'as.list': object 'org.Hs.egSYMBOL' not found
--- failed re-building ‘SourceSet.Rmd’
SUMMARY: processing the following file failed:
‘SourceSet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘SourceSet.Rmd’ using rmarkdown
Failed with error: 'there is no package called 'hgu95av2.db''
Quitting from lines 512-527 [unnamed-chunk-25] (SourceSet.Rmd)
Error: processing vignette 'SourceSet.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'as.list': object 'org.Hs.egSYMBOL' not found
--- failed re-building ‘SourceSet.Rmd’
SUMMARY: processing the following file failed:
‘SourceSet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-arm64