CRAN Package Check Results for Package speakeasyR

Last updated on 2024-06-19 14:58:53 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-fedora-clang	0.1.0			319.33	ERROR
r-devel-linux-x86_64-fedora-gcc	0.1.0			401.60	ERROR
r-release-macos-arm64	0.1.0			362.00	OK
r-release-macos-x86_64	0.1.0			586.00	OK
r-release-windows-x86_64	0.1.0	169.00	315.00	484.00	OK
r-oldrel-macos-arm64	0.1.0			574.00	WARN
r-oldrel-macos-x86_64	0.1.0			630.00	WARN
r-oldrel-windows-x86_64	0.1.0	174.00	290.00	464.00	OK

Additional issues

gcc-ASAN noSuggests

Check Details

Version: 0.1.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘scRNAseq’ Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘speakeasyr.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-clang/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/ordering-1.png 288x288 pixels, 8 bits/pixel, 247 colors in palette Input IDAT size = 3342 bytes Input file size = 4173 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3006 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3006 Output IDAT size = 3006 bytes (336 bytes decrease) Output file size = 3837 bytes (336 bytes = 8.05% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/tougher-1.png 288x288 pixels, 8 bits/pixel, 217 colors in palette Input IDAT size = 11480 bytes Input file size = 12233 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11023 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11023 Output IDAT size = 11023 bytes (457 bytes decrease) Output file size = 11764 bytes (469 bytes = 3.83% decrease) Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd) Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics: there is no package called 'scRNAseq' --- failed re-building ‘speakeasyr.Rmd’ SUMMARY: processing the following file failed: ‘speakeasyr.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘speakeasyr.Rmd’ using rmarkdown ** Processing: /data/gannet/ripley/R/packages/tests-devel/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/ordering-1.png 288x288 pixels, 8 bits/pixel, 247 colors in palette Input IDAT size = 3339 bytes Input file size = 4170 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 2959 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 2959 Output IDAT size = 2959 bytes (380 bytes decrease) Output file size = 3790 bytes (380 bytes = 9.11% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/speakeasyR.Rcheck/vign_test/speakeasyR/vignettes/speakeasyr_files/figure-html/tougher-1.png 288x288 pixels, 8 bits/pixel, 217 colors in palette Input IDAT size = 11465 bytes Input file size = 12218 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11025 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11025 Output IDAT size = 11025 bytes (440 bytes decrease) Output file size = 11766 bytes (452 bytes = 3.70% decrease) Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd) Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics: there is no package called 'scRNAseq' --- failed re-building ‘speakeasyr.Rmd’ SUMMARY: processing the following file failed: ‘speakeasyr.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.1.0
Check: running R code from vignettes
Result: WARN Errors in running code in vignettes: when running code in ‘speakeasyr.Rmd’ ... > color <- rainbow(length(unique(memb)))[memb[ordering]] > heatmap(adj, scale = "none", Rowv = NA, Colv = NA, + RowSideColors = color) > expression <- scRNAseq::FletcherOlfactoryData() When sourcing ‘speakeasyr.R’: Error: there is no package called ‘scRNAseq’ Execution halted ‘speakeasyr.Rmd’ using ‘UTF-8’... failed Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.1.0
Check: re-building of vignette outputs
Result: NOTE Error(s) in re-building vignettes: ... --- re-building ‘speakeasyr.Rmd’ using rmarkdown Quitting from lines 102-105 [obtaining-data] (speakeasyr.Rmd) Error: processing vignette 'speakeasyr.Rmd' failed with diagnostics: there is no package called 'scRNAseq' --- failed re-building ‘speakeasyr.Rmd’ SUMMARY: processing the following file failed: ‘speakeasyr.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64