aldh2 |
ALDH2 markers and Alcoholism |
apoeapoc |
APOE/APOC1 markers and Schizophrenia |
bt |
Bradley-Terry model for contingency table |
cf |
Cystic Fibrosis data |
chow.test |
Chow's test for heterogeneity in two regressions |
crohn |
Crohn disease data |
fa |
Friedreich Ataxia data |
fbsize |
Sample size for family-based linkage and association design |
fsnps |
A case-control data involving four SNPs with missing genotype |
gc.em |
Gene counting for haplotype analysis |
gcontrol |
genomic control |
gcp |
Permutation tests using GENECOUNTING |
genecounting |
Gene counting for haplotype analysis |
gif |
Kinship coefficient and genetic index of familiality |
hap |
Haplotype reconstruction |
hap.em |
Gene counting for haplotype analysis |
hap.score |
Score Statistics for Association of Traits with Haplotypes |
hla |
The HLA data |
htr |
Haplotype trend regression |
hwe |
Hardy-Weinberg equlibrium test for multiallelic marker |
hwe.hardy |
Hardy-Weinberg equilibrium test using MCMC |
kbyl |
LD statistics for two multiallelic loci |
kin.morgan |
kinship matrix for simple pedigree |
makeped |
A function to prepare pedigrees in post-MAKEPED format |
mao |
A study of Parkinson's disease and MAO gene |
mia |
multiple imputation analysis for hap |
mtdt |
Transmission/disequilibrium test of a multiallelic marker |
muvar |
Means and variances under 1- and 2- locus (biallelic) QTL model |
nep499 |
A study of Alzheimer's disease with eight SNPs and APOE |
pbsize |
Power for population-based association design |
pedtodot |
Converting pedigree(s) to dot file(s) |
pfc |
Probability of familial clustering of disease |
pfc.sim |
Probability of familial clustering of disease |
pgc |
Preparing weight for GENECOUNTING |
plot.hap.score |
Plot Haplotype Frequencies versus Haplotype Score Statistics |
pm |
Permutation tests using GENECOUNTING |
pmplus |
Permutation tests using GENECOUNTING |
print.hap.score |
Print a hap.score object |
s2k |
Statistics for 2 by K table |
snca |
A study of Parkinson's disease and SNCA makers |
tbyt |
LD statistics for two SNPs |
whscore |
Whittemore-Halpern scores for allele-sharing |