Likelihood inference of trait associations with SNP haplotypes and other attributes using the EM Algorithm

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Documentation for package `hapassoc' version 0.6

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hapassoc EM algorithm to fit maximum likelihood estimates of trait associations with SNP haplotypes
hypoDat Simulated data for a hypothetical binary trait
hypoDatGeno Simulated data for a hypothetical genetic SNPs
pre.hapassoc Pre-process the data before fitting it with hapassoc
summary.hapassoc Summarize results of the hapassoc function