PosteriorMode {Geneland}R Documentation

Map of mode of posterior distribution of population membership

Description

Plots a map giving the modal population as a color code for each pixel.

Usage

PosteriorMode(coordinates,path.mcmc,write=FALSE,plotit=TRUE,
                          printit=FALSE,file=NULL,main.title=NULL)

Arguments

coordinates Spatial coordinates of individuals. A matrix with 2 columns and one line per individual.
path.mcmc Path to output files directory
write Logical: if TRUE the modal class of each individual is written in a plain ascci file named posterior.mode.txt
plotit Logical: if TRUE the map is plotted
printit Logical : if TRUE, figures are also printed
file Character : Path to file where figures should be printed
main.title Character : Title to appear on top of the graphic

Author(s)

Gilles Guillot

References

A spatial statistical model for landscape genetics, Guillot, Estoup, Mortier, Cosson, Genetics, 2005

Guillot, Mortier, Estoup, Geneland : A program for landscape genetics. Molecular Ecology Notes, 2005.


[Package Geneland version 0.7 Index]