Collection of Genetic Data Analysis Tools

Documentation for package ‘GeneticTools’ version 0.3.1

R/GeneticTools-package	GeneticTools
annotTrack	Example Annotation Track
calcDistances	Calculate Distances Between Time Series
eQTL	Perform an eQTL Analysis
genotData	Simulated Genotype Data
genotypePlot	Expression Boxplots
getRegionsOI	Filter Annotation File
gtfToBed	Extract the Chromosomal Information Required in bed Format from an imported gtf table.
mdr	Perform a MDR.
plot-method	Plot an eqtl Object
plot-method	Plot an MDR Object
plot.eqtl	Plot an eqtl Object
plot.mdr	Plot an MDR Object
predict.mdr	Calculates MDR Ensemble Classifier
print-method	Print an eqtl Object
print-method	Print an mdr Object
print.eqtl	Print an eqtl Object
print.mdr	Print an mdr Object
realSNPs	Simulated SNP Data
recodeData	Recode a Genotype Data Matrix.
summary-method	Summarize an eqtl Object
summary.eqtl	Summarize an eqtl Object
visTrans	Visualize trans-eQTL Results
Xgene	Simulated Expression Data