icd9-package | tools for working with ICD-9 codes, and finding comorbidities |
ahrqComorbid | AHRQ comorbidities |
ahrqComorbidAll | AHRQ comorbidities, with HTN, CHF and renal failure subgroups |
ahrqComorbidNames | Comorbidity names |
ahrqComorbidNamesAbbrev | Comorbidity names |
ahrqComorbidNamesHtn | Comorbidity names |
ahrqComorbidNamesHtnAbbrev | Comorbidity names |
charlsonComorbidNames | Comorbidity names |
charlsonComorbidNamesAbbrev | Comorbidity names |
convert | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
elixComorbid | Elixhauser comorbidities |
elixComorbidNames | Comorbidity names |
elixComorbidNamesAbbrev | Comorbidity names |
elixComorbidNamesHtn | Comorbidity names |
elixComorbidNamesHtnAbbrev | Comorbidity names |
icd9 | tools for working with ICD-9 codes, and finding comorbidities |
icd9Chapters | ICD-9-CM chapters |
icd9chapters | ICD-9-CM chapters |
icd9ChaptersMajor | ICD-9-CM chapters |
icd9ChaptersSub | ICD-9-CM chapters |
icd9Charlson | Calculate Charlson Comorbidity Index (Charlson Score) |
icd9Charlson.data.frame | Calculate Charlson Comorbidity Index (Charlson Score) |
icd9CharlsonComorbid | Calculate Charlson Comorbidity Index (Charlson Score) |
icd9Children | Expand ICD-9 codes to all possible sub-codes |
icd9ChildrenDecimal | Expand ICD-9 codes to all possible sub-codes |
icd9ChildrenShort | Expand ICD-9 codes to all possible sub-codes |
icd9ComorbidDfToMat | convert matrix of comorbidities into data frame, preserving visitId information |
icd9ComorbidMatToDf | convert matrix of comorbidities into data frame, preserving visitId information |
icd9Condense | Condense ICD-9 code by replacing complete families with parent codes |
icd9CondenseDecimal | Condense ICD-9 code by replacing complete families with parent codes |
icd9CondenseShort | Condense ICD-9 code by replacing complete families with parent codes |
icd9CondenseToMajor | Condense ICD-9 code by replacing complete families with parent codes |
icd9CondenseToMajorDecimal | Condense ICD-9 code by replacing complete families with parent codes |
icd9CondenseToMajorShort | Condense ICD-9 code by replacing complete families with parent codes |
icd9Count | count ICD codes or comorbidities for each patient |
icd9CountComorbidBin | count ICD codes or comorbidities for each patient |
icd9CountWide | count ICD codes or comorbidities for each patient |
icd9DecimalToParts | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9DecimalToShort | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9DiffComorbid | show the difference between two comorbidity mappings |
icd9ExpandRange | take two ICD-9 codes and expand range to include all child codes |
icd9ExpandRangeDecimal | take two ICD-9 codes and expand range to include all child codes |
icd9ExpandRangeMajor | take two ICD-9 codes and expand range to include all child codes |
icd9ExpandRangeShort | take two ICD-9 codes and expand range to include all child codes |
icd9Explain | explain ICD9 codes |
icd9Explain.character | explain ICD9 codes |
icd9Explain.factor | explain ICD9 codes |
icd9Explain.list | explain ICD9 codes |
icd9Explain.numeric | explain ICD9 codes |
icd9ExplainDecimal | explain ICD9 codes |
icd9ExplainShort | explain ICD9 codes |
icd9FilterInvalid | Filter ICD-9 codes by invalidity. |
icd9FilterPoa | Filters data frame based on present-on-arrival flag |
icd9FilterPoaNo | Filters data frame based on present-on-arrival flag |
icd9FilterPoaNotNo | Filters data frame based on present-on-arrival flag |
icd9FilterPoaNotYes | Filters data frame based on present-on-arrival flag |
icd9FilterPoaYes | Filters data frame based on present-on-arrival flag |
icd9FilterValid | Filter ICD-9 codes by validity. |
icd9GetInvalid | invalid subset of decimal or short ICD-9 codes |
icd9GetInvalidDecimal | invalid subset of decimal or short ICD-9 codes |
icd9GetInvalidMappingDecimal | validate an icd9 mapping to comorbidities |
icd9GetInvalidMappingShort | validate an icd9 mapping to comorbidities |
icd9GetInvalidShort | invalid subset of decimal or short ICD-9 codes |
icd9GetMajor | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9GetReal | Check whether ICD-9 codes exist |
icd9GetRealDecimal | Check whether ICD-9 codes exist |
icd9GetRealShort | Check whether ICD-9 codes exist |
icd9GetValid | invalid subset of decimal or short ICD-9 codes |
icd9GetValidDecimal | invalid subset of decimal or short ICD-9 codes |
icd9GetValidShort | invalid subset of decimal or short ICD-9 codes |
icd9Hierarchy | ICD9-CM diagnosis code lookup |
icd9Is | are the given codes numeric, V or E type? |
icd9IsE | are the given codes numeric, V or E type? |
icd9IsN | are the given codes numeric, V or E type? |
icd9IsReal | Check whether ICD-9 codes exist |
icd9IsRealDecimal | Check whether ICD-9 codes exist |
icd9IsRealShort | Check whether ICD-9 codes exist |
icd9IsV | are the given codes numeric, V or E type? |
icd9IsValid | check whether ICD-9 codes are syntactically valid |
icd9IsValidDecimal | check whether ICD-9 codes are syntactically valid |
icd9IsValidMajor | check whether ICD-9 codes are syntactically valid |
icd9IsValidMapping | validate an icd9 mapping to comorbidities |
icd9IsValidMappingDecimal | validate an icd9 mapping to comorbidities |
icd9IsValidMappingShort | validate an icd9 mapping to comorbidities |
icd9IsValidShort | check whether ICD-9 codes are syntactically valid |
icd9IsValidShortE | check whether ICD-9 codes are syntactically valid |
icd9IsValidShortN | check whether ICD-9 codes are syntactically valid |
icd9IsValidShortV | check whether ICD-9 codes are syntactically valid |
icd9LongToWide | convert ICD data from long to wide format |
icd9MajMinToCode | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9MajMinToDecimal | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9MajMinToParts | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9MajMinToShort | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9PartsToDecimal | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9PartsToShort | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9PoaChoices | present-on-admission flags |
icd9ShortToDecimal | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9ShortToParts | work around Rcpp issue https://github.com/RcppCore/Rcpp/issues/272 |
icd9Sort | sort short-form icd9 codes |
icd9SortDecimal | sort short-form icd9 codes |
icd9SortShort | sort short-form icd9 codes |
icd9Valid | check whether ICD-9 codes are syntactically valid |
icd9ValidDecimal | check whether ICD-9 codes are syntactically valid |
icd9ValidShort | check whether ICD-9 codes are syntactically valid |
icd9WideToLong | convert ICD data from wide to long format |
package-icd9 | tools for working with ICD-9 codes, and finding comorbidities |
quanDeyoComorbid | Quan adaptation of Deyo/Charlson comorbidities |
quanElixComorbid | Quan adaptation of Elixhauser comorbidities |
quanElixComorbidNames | Comorbidity names |
quanElixComorbidNamesAbbrev | Comorbidity names |
quanElixComorbidNamesHtn | Comorbidity names |
quanElixComorbidNamesHtnAbbrev | Comorbidity names |
%i9d% | take two ICD-9 codes and expand range to include all child codes |
%i9da% | take two ICD-9 codes and expand range to include all child codes |
%i9mj% | take two ICD-9 codes and expand range to include all child codes |
%i9s% | take two ICD-9 codes and expand range to include all child codes |
%i9sa% | take two ICD-9 codes and expand range to include all child codes |