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| EcoGenetics-package | Analysis of Phenotypic, Genotypic and Environmental Data |
| aue.char2num | Converting data coded with characters into data coded by numbers |
| aue.image2df | Transforming a raster into a data frame with cartesian coordinates |
| aue.rescale | Scaling a data frame or matrix to 0 - 1 range |
| aue.sort | Ordering cells in a data frame or matrix |
| coordinates | Coordinates |
| eco | Eco |
| eco.2columns | Converting a diploid ecogen genetic data frame with two alleles per column into a data frame with one allele per column |
| eco.2geneland | Creating input data for Geneland with an ecogen object |
| eco.2genepop | Exporting an ecogen genetic data frame into Genepop format |
| eco.2gstudio | Converting a diploid ecogen genetic data frame into a gstudio object |
| eco.2hierfstat | Converting an ecogen genetic data frame into a hierfstat data frame |
| eco.2spagedi | Exporting an ecogen genetic data frame into SPAGeDI format |
| eco.alfreq | Allelic frequency histograms for an ecogen genetic data frame |
| eco.append | Creating an updated ecogen object by adding results to the slot @OUT |
| eco.association | Chi-square and Fisher's exact test for association of loci and alleles with a factor |
| eco.cbind | Combining the columns of two ecogen object |
| eco.clear | Clearing the working environment, maintaining only the specified objects |
| eco.cormantel | Mantel and partial Mantel correlograms |
| eco.correlog | Moran's I, Geary's C and bivariate Moran's Ixy correlograms |
| eco.detrend | Detrending spatial data with polynomial interpolation |
| eco.forestplot | Forestplot graphs |
| eco.forestplot-method | Forestplot graphs |
| eco.gsa | Global spatial analysis |
| eco.lagweight | Obtention of a list of spatial weights for classes defined by inter-individual distances or nearest-neighbors |
| eco.lmtree | Fitting Multiple Linear Regression models by stepwise AIC selection and Multiple Classification and Regression Trees via party |
| eco.lsa | Local spatial analysis |
| eco.mantel | Mantel and partial Mantel tests |
| eco.merge | Merging two ecogen objects. Ordering the rows of an ecogen object according to the rows of another |
| eco.NDVI | Generating atmospherically corrected NDVI and MSAVI2 images for temporal series of Landsat 5 and 7 |
| eco.NDVI.post | Postprocessing for NDVI and MSAVI 2 temporal series of Landsat 5 and 7 |
| eco.order | Ordering the rows of the data frames contained in an ecogen object |
| eco.pairtest | Kruskall - Wallis + Wilcoxon (Mann-Whitney U) and aov + Tukey-HSD tests for an ecogen object |
| eco.post.geneland | Log posterior probability plot for Geneland repetitions with fixed K |
| eco.rankplot | Rankplot graphs |
| eco.rankplot-method | Rankplot graphs |
| eco.rbind | Combining the rows of two ecogen objects |
| eco.remove | Creating an updated ecogen object by removing results of the slot @OUT |
| eco.subset | Subsetting an ecogen object by group |
| eco.theilsen | Theil-sen regression for a raster time series |
| eco.variogram | Empirical variogram |
| eco.weight | Spatial weights |
| eco2 | Eco2 |
| eco3 | Eco3 |
| ecogen | Creating a new ecogen object. |
| ecogen2genind | Conversion between genind and ecogen, and vice versa |
| EcoGenetics | Analysis of Phenotypic, Genotypic and Environmental Data |
| environment | environment |
| genind2ecogen | Conversion between genind and ecogen, and vice versa |
| genotype | genotype |
| phenotype | phenotype |
| structure | structure |
| summary-method | Summary for eco.lmtree output |
| summary-method | Summary for ecogen objects |
| tab | tab |