A B C D E F G H I J L M N O P R S T U V W X misc
abbreviateTimeLabels | Abbreviate a list of times by removing commonalities (e.g. year) |
addColumn | Add a column to an oce object |
adp | ADP (acoustic-doppler profiler) dataset |
adp-class | Class to store acoustic Doppler profiler data |
adv | ADV (acoustic-doppler velocimeter) dataset |
adv-class | Class to store acoustic Doppler velocimeter data |
airRho | Air density |
angleRemap | Convert angles from 0:360 to -180:180 |
applyMagneticDeclination | Earth magnetic declination |
approx3d | Trilinear interpolation in a 3D array |
as.coastline | Coerce data into coastline dataset |
as.ctd | Coerce data into ctd dataset |
as.drifter | Coerce data into drifter dataset |
as.echosounder | Coerce data into echosounder dataset |
as.gps | Coerce data into a GPS dataset |
as.lisst | Coerce data into a lisst object |
as.lobo | Coerce data into lobo dataset |
as.met | Coerce data into met dataset |
as.sealevel | Coerce data into sea-level dataset |
as.section | Coerce ctd data into section dataset |
as.tdr | Create a TDR object |
as.topo | Coerce data into topo dataset |
as.windrose | Create a windrose object |
bcdToInteger | Decode BCD to integer |
beamName | Name an acoustic-doppler beam. |
beamToXyz | Change ADV or ADP coordinate systems |
beamToXyzAdp | Change ADP coordinate system |
beamToXyzAdv | Convert ADV from beam coordinates to xyz coordinates |
beamUnspreadAdp | Adjust ADP signal for spherical spreading |
binApply | Apply a function to binned matrix data |
binApply1D | Apply a function to binned matrix data |
binApply2D | Apply a function to binned matrix data |
binAverage | Bin-average a vector y, based on x values |
binCount | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
binCount1D | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
binCount2D | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
binmapAdp | Bin-map an ADP object |
binMean | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
binMean1D | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
binMean2D | Bin-count or bin-average f=f(x) or f=f(x,y), based on x or (x,y) values |
byteToBinary | Format bytes as binary |
cm | Current-meter record |
cm-class | Class to store current meter data |
coastline-class | Class to store coastline data |
coastlineBest | Find the name of the best coastline file |
coastlineWorld | World coastline |
colormap | Calculate color map |
coordinate | Determine coordinate system |
coriolis | Coriolis parameter on rotating earth |
ctd | A CTD profile in Halifax Harbour |
ctd-class | Class to store hydrographic data |
ctdAddColumn | Add a column to a CTD file |
ctdDecimate | Decimate a CTD profile |
ctdFindProfiles | Find profiles within a towyow CTD record |
ctdRaw | Seawater CTD profile, without trimming of extraneous data |
ctdTrim | Trim start/end portions of a CTD cast |
ctdUpdateHeader | Update a CTD header |
ctimeToSeconds | Interpret a character string as a time interval |
decimate | Smooth and decimate an oce object |
decodeHeaderNortek | Decode a Nortek header |
decodeTime | Decode a time, similar to as.POSIXct() |
despike | Remove spikes from a time series |
detrend | Detrend a set of observations |
distance | Access or modify part of an Oce object |
drawDirectionField | Draw a direction field |
drawIsopycnals | Add isopycnal curves to TS plot |
drawPalette | Draw palette on RHS of plot device |
drifter | ARGO drifter dataset |
drifter-class | Class for drifter data |
echosounder | echosounder dataset |
echosounder-class | Class to store echosounder data |
eclipticalToEquatorial | Convert ecliptical to equatorial coordinate |
elevation | Access or modify part of an Oce object |
enuToOther | Change ADV or ADP coordinate systems |
enuToOtherAdp | Convert east-north-up to other coordinate |
enuToOtherAdv | Convert east-north-up to other coordinate |
equatorialToLocalHorizontal | Convert equatorial to local horizontal coordinate |
errorbars | Draw error bars on an existing xy diagram |
extract | Extract data from an oce object |
fillGap | Fill a gap in an oce object |
findBottom | Find the ocean bottom in an echosounder object |
findInOrdered | Find indices of tiems in an ordered vector |
formatCI | Confidence interval in parenthetic notation |
formatPosition | Geographical position in degrees and minutes |
fullFilename | full name of file, including path |
geodDist | Geodesic distance on earth |
geodGc | Great-circle segments between points on earth |
geodXy | Convert lon/lat to x/y on earth |
GMTOffsetFromTz | Determine time offset from timezone |
gps-class | Class to store gps data |
grad | Gradient of a matrix |
gravity | Acceleration due to earth gravity |
head | Ends of 'oce' objects. |
head.adp | Ends of 'oce' objects. |
header | Return the header for an Oce data object |
heading | Access or modify part of an Oce object |
heading<- | Access or modify part of an Oce object |
imagep | Plot an image with a color palette |
integerToAscii | Decode integer to corresponding ASCII code |
integrateTrapezoid | Use trapezoidal integration |
interpBarnes | Grid data using Barnes algorithm |
is.beam | Determine coordinate system |
is.enu | Determine coordinate system |
is.xyz | Determine coordinate system |
julianCenturyAnomaly | Julian-Day number to Julian century |
julianDay | Convert a POSIXt time to a Julian day |
landsat-class | Class to store landsat data |
landsatTrim | Trim a landsat image to a lat-lon box |
latFormat | Format a latitude |
latitude | Access or modify part of an Oce object |
latitude<- | Access or modify part of an Oce object |
latlonFormat | Format a latitude-longitude pair |
lisst | LISST dataset |
lisst-class | Class to store LISST data |
lobo | lobo dataset |
lobo-class | Class to store LOBO data |
loggerToc | Decode table-of-contents file from a datalogger |
lonFormat | Format a longitude |
longitude | Access or modify part of an Oce object |
longitude<- | Access or modify part of an Oce object |
magneticField | Earth magnetic declination, inclination, and intensity |
makeFilter | Make a digital filter |
makeSection | Bind CTD profiles together into a cross section |
map2lonlat | Find lon-lat coordinates of a point on a map |
mapContour | Plot contours on a existing map |
mapImage | Plot an image on a existing map |
mapLines | Plot lines on a existing map |
mapLocator | Locate points on a existing map |
mapLongitudeLatitudeXY | Convert from longitude and latitude to x and y |
mapMeridians | Plot meridians on an existing map |
mapPlot | Plot a map |
mapPoints | Plot points on a existing map |
mapPolygon | Plot a polygon on a existing map |
mapScalebar | Draw a scalebar on an existing map |
mapText | Plot text on a existing map |
mapZones | Plot zones on an existing map |
matchBytes | Locate byte sequences in a raw vector |
matrixSmooth | Smooth a matrix. |
met | Sample meteorological object |
met-class | Class to store meteorological data |
moonAngle | Lunar angle as function of space and time. |
nao | North Atlantic Oscillation Index |
nitrate | Access or modify part of an Oce object |
nitrate<- | Access or modify part of an Oce object |
nitrite | Access or modify part of an Oce object |
nitrite<- | Access or modify part of an Oce object |
numberAsHMS | Convert a numeric time to hour, minute, and second |
numberAsPOSIXct | Convert a numeric time to a POSIXct time |
oce | base class of oce package |
oce-class | base class of oce package |
oce.as.POSIXlt | More general form of as.POSIXlt |
oce.as.raw | Version of as.raw() that clips data |
oce.axis.POSIXct | Modified version of axis.POSIXct |
oce.plot.ts | Plot a time-series, obeying the timezone |
oce.write.table | Write the data portion of object to a file |
oceApprox | Interpolate 1D data with Unesco or Reiniger-Ross algorithm |
oceColors9A | Create a palette of colours |
oceColors9B | Create a palette of colours |
oceColorsGebco | Create a palette of colours |
oceColorsJet | Create a palette of colours |
oceColorsPalette | Create a palette of colours |
oceColorsTwo | Create a palette of colours |
oceContour | Contour with ability to flip x and y |
oceConvolve | Convolve two time series |
oceDebug | Print a debugging message |
oceEdit | Edit an oce object |
oceFilter | Filter a time-series, possibly recursively |
oceMagic | Find the type of an oceanographic data file |
ocePmatch | Partial matching of strings or numbers |
oceSmooth | Smooth an oce object |
oceSpectrum | Wrapper to give normalized spectrum |
oxygen | Access or modify part of an Oce object |
oxygen<- | Access or modify part of an Oce object |
parseLatLon | Parse a latitude or longitude string |
phosphate | Access or modify part of an Oce object |
phosphate<- | Access or modify part of an Oce object |
pitch | Access or modify part of an Oce object |
pitch<- | Access or modify part of an Oce object |
plot-method | Plot ADP data |
plot-method | Plot ADV data |
plot-method | Plot cm (current meter) data |
plot-method | Plot a coastline |
plot-method | Plot seawater CTD data |
plot-method | Plot drifter data |
plot-method | Plot echosounder data |
plot-method | Plot a gps object |
plot-method | Plot landsat data |
plot-method | Plot LISST data |
plot-method | Plot lobo data |
plot-method | Plot meteorological data |
plot-method | Plot sealevel data |
plot-method | Plot a CTD section |
plot-method | Plot tdr (temperature-depth recorder) data |
plot-method | Plot a tidal fit |
plot-method | Plot topography data |
plot-method | Plot a wind rose diagram |
plot.adp | Plot ADP data |
plot.adv | Plot ADV data |
plot.cm | Plot cm (current meter) data |
plot.coastline | Plot a coastline |
plot.ctd | Plot seawater CTD data |
plot.drifter | Plot drifter data |
plot.echosounder | Plot echosounder data |
plot.gps | Plot a gps object |
plot.landsat | Plot landsat data |
plot.lisst | Plot LISST data |
plot.lobo | Plot lobo data |
plot.met | Plot meteorological data |
plot.sealevel | Plot sealevel data |
plot.section | Plot a CTD section |
plot.tdr | Plot tdr (temperature-depth recorder) data |
plot.tidem | Plot a tidal fit |
plot.topo | Plot topography data |
plot.windrose | Plot a wind rose diagram |
plotInset | Plot an inset diagram |
plotPolar | Draw a polar plot. |
plotProfile | Plot a CTD profile of various quantities |
plotScan | Plot seawater data in a low-level fashion |
plotSticks | Draw a stick-plot diagram |
plotTaylor | Plot a model-data comparison diagram. |
plotTS | Plot temperature-salinity diagram |
predict.tidem | Predict a time series from a tidal model |
pressure | Access or modify part of an Oce object |
pressure<- | Access or modify part of an Oce object |
prettyPosition | Pretty lat/lon in deg, min, sec |
processingLog | Add an item to object processingLog |
processingLog<- | Add an item to object processingLog |
processingLogItem | Add an item to object processingLog |
processingLogShow | Add an item to object processingLog |
pwelch | Welch periodogram |
rangeExtended | Calculate range, extended a little |
rangeLimit | Substitute NA for data outside a range |
read.adp | Read an ADP data file |
read.adp.nortek | Read an ADP data file |
read.adp.rdi | Read an ADP data file |
read.adp.sontek | Read an ADP data file |
read.adp.sontek.serial | Read an ADP data file |
read.adv | Read an ADV data file |
read.adv.nortek | Read an ADV data file |
read.adv.sontek.adr | Read an ADV data file |
read.adv.sontek.serial | Read an ADV data file |
read.adv.sontek.text | Read an ADV data file |
read.aquadopp | Read an ADP data file |
read.aquadoppHR | Read an ADP data file |
read.aquadoppProfiler | Read an ADP data file |
read.cm | Read a current-meter data file |
read.cm.s4 | Read a current-meter data file |
read.coastline | Scan a coastline data file |
read.coastline.openstreetmap | Scan a coastline data file |
read.coastline.shapefile | Scan a coastline data file |
read.ctd | Read a CTD data file |
read.ctd.itp | Read a CTD data file |
read.ctd.odf | Read a CTD data file |
read.ctd.sbe | Read a CTD data file |
read.ctd.woce | Read a CTD data file |
read.ctd.woce.other | Read a CTD data file |
read.drifter | Read a drifter data file |
read.echosounder | Read an echosounder data file |
read.gps | Scan a gps data file |
read.landsat | Read a landsat data file |
read.lisst | Read a LISST data file |
read.lobo | Read a lobo data file |
read.met | Read a meteorological data file |
read.observatory | Read observatory data file |
read.observatory.ctd | Read observatory data file |
read.oce | Read an oceanographic data file |
read.sealevel | Read a sea-level data file |
read.section | Read a section containing multiple CTD profiles |
read.tdr | Read temperature-depth recorder file |
read.topo | Read an topography file |
rescale | Rescale values to lie in a given range |
resizableLabel | Provide axis names in adjustable sizes |
retime | Adjust the time within Oce object |
roll | Access or modify part of an Oce object |
roll<- | Access or modify part of an Oce object |
runlm | Calculate running linear models |
salinity | Access or modify part of an Oce object |
salinity<- | Access or modify part of an Oce object |
sealevel | Sea-level data set, from Halifax Harbour |
sealevel-class | Class to store sealevel data |
sealevelTuktoyaktuk | Sea-level data set acquired in 1975 at Tuktoyaktuk |
secondsToCtime | Time interval as colon-separated string |
section | Hydrographic section |
section-class | Class to store hydrographic section data |
sectionGrid | Grid a section |
sectionSmooth | Smooth a section |
sectionSort | Sort a section |
show-method | Class to store acoustic Doppler profiler data |
show-method | Class to store acoustic Doppler velocimeter data |
show-method | Class to store current meter data |
show-method | Class to store coastline data |
show-method | Class to store hydrographic data |
show-method | Class to store echosounder data |
show-method | Class to store gps data |
show-method | Class to store landsat data |
show-method | Class to store LISST data |
show-method | Class to store LOBO data |
show-method | Class to store meteorological data |
show-method | base class of oce package |
show-method | Class to store sealevel data |
show-method | Class to store hydrographic section data |
show-method | Class to store temperature-depth recorder data |
showMetadataItem | Show metadata item |
siderealTime | Convert a POSIXt time to a sidereal time |
sigmaTheta | Access or modify part of an Oce object |
sigmaTheta<- | Access or modify part of an Oce object |
silicate | Access or modify part of an Oce object |
silicate<- | Access or modify part of an Oce object |
soi | Southern Oscillation Index |
spice | Access or modify part of an Oce object |
standardDepths | Standard oceanographic depths |
subset-method | Subset an adp object |
subset-method | Subset an adv object |
subset-method | Subset a cm object |
subset-method | Subset a coastline object |
subset-method | Subset a ctd object |
subset-method | Subset an echosounder object |
subset-method | Subset a lisst object |
subset-method | Subset an oce object |
subset-method | Subset a sealevel object |
subset-method | Subset a section object |
subset-method | Subset a tdr object |
subset-method | Subset a topo object |
subset.adp | Subset an adp object |
subset.adv | Subset an adv object |
subset.cm | Subset a cm object |
subset.coastline | Subset a coastline object |
subset.ctd | Subset a ctd object |
subset.echosounder | Subset an echosounder object |
subset.lisst | Subset a lisst object |
subset.oce | Subset an oce object |
subset.sealevel | Subset a sealevel object |
subset.section | Subset a section object |
subset.tdr | Subset a tdr object |
subset.topo | Subset a topo object |
subtractBottomVelocity | Subtract bottom velocity from ADP velocity |
summary-method | Summarize an ADP object |
summary-method | Summarize an ADV object |
summary-method | Summarize a cm (current meter) object |
summary-method | Summarize a coastline data object |
summary-method | Summarize a CTD object |
summary-method | Summarize a drifter object |
summary-method | Summarize an echosounder object |
summary-method | Summarize a gps object |
summary-method | Summarize a landsat object |
summary-method | Summarize a LISST object |
summary-method | Summarize a lobo data object |
summary-method | Summarize a met object |
summary-method | Summarize a sealevel object |
summary-method | Summarize a CTD section |
summary-method | Summarize a tdr object |
summary-method | Summarize a tide-model object |
summary-method | Summarize a topography data object |
summary-method | Summarize a windrose data object |
summary.adp | Summarize an ADP object |
summary.adv | Summarize an ADV object |
summary.cm | Summarize a cm (current meter) object |
summary.coastline | Summarize a coastline data object |
summary.ctd | Summarize a CTD object |
summary.drifter | Summarize a drifter object |
summary.echosounder | Summarize an echosounder object |
summary.gps | Summarize a gps object |
summary.landsat | Summarize a landsat object |
summary.lisst | Summarize a LISST object |
summary.lobo | Summarize a lobo data object |
summary.met | Summarize a met object |
summary.sealevel | Summarize a sealevel object |
summary.section | Summarize a CTD section |
summary.tdr | Summarize a tdr object |
summary.tidem | Summarize a tide-model object |
summary.topo | Summarize a topography data object |
summary.windrose | Summarize a windrose data object |
sunAngle | Solar angle as function of space and time. |
swAbsoluteSalinity | Seawater absolute salinity, in TEOS-10 |
swAlpha | Seawater thermal expansion coefficient |
swAlphaOverBeta | Ratio of seawater thermal expansion coefficient to haline contraction coefficient |
swBeta | Seawater haline contraction coefficient |
swConductivity | Seawater thermal conductivity |
swConservativeTemperature | Seawater conservative temperature, in TEOS-10. |
swDepth | Water depth |
swDynamicHeight | Dynamic height of seawater profile |
swLapseRate | Seawater lapse rate |
swN2 | Squared buoyancy frequency for seawater |
swPressure | Water pressure |
swRho | Seawater density |
swRrho | Density ratio |
swSCTp | Salinity from electrical conductivity, temperature and pressure |
swSigma | Seawater density anomaly |
swSigmaT | Seawater quasi-potential density anomaly |
swSigmaTheta | Seawater potential density anomaly |
swSoundAbsorption | Seawater sound absorption in dB/m |
swSoundSpeed | Seawater sound speed |
swSpecificHeat | Seawater specific heat |
swSpice | Seawater spiciness |
swSTrho | Seawater salinity from temperature and density |
swTFreeze | Seawater freezing temperature |
swTheta | Seawater potential temperature |
swTSrho | Seawater temperature from salinity and density |
swViscosity | Seawater viscosity |
swZ | Water depth |
tail | Ends of 'oce' objects. |
tail.adp | Ends of 'oce' objects. |
tdr | tdr (temperature-data recorder) dataset |
tdr-class | Class to store temperature-depth recorder data |
tdrPatm | Estimate atmospheric pressure in tdr record |
tdrTrim | Trim start/end portions of a tdr cast |
temperature | Access or modify part of an Oce object |
temperature<- | Access or modify part of an Oce object |
teos | Interface to TEOS-10 library |
teosSetLibrary | Set location of TEOS-10 library |
threenum | Calculate min, mean, and max values |
tidedata | Tidal constituent information |
tidem | Fit a tidal model to a timeseries |
tidem-class | Class to store tidal-constituent models |
tidemAstron | Do ephemeris calculations for tidem |
tidemVuf | Do ephemeris calculations for tidem |
time | Access or modify part of an Oce object |
time.oce | Extract time from an oce object |
toEnu | Change ADV or ADP coordinate systems |
toEnuAdp | Convert from ENU coordinates |
toEnuAdv | Convert from ENU coordinates |
topo-class | Class to store topographic data |
topoInterpolate | Interpolate within a topography dataset |
topoWorld | Global topographic dataset at half-degree resolution |
tritium | Access or modify part of an Oce object |
unabbreviateYear | Determine year from various abbreviations |
undriftTime | Correct for drift in instrument clock |
ungrid | Extract (x, y, z) from (x, y, grid) |
unwrapAngle | Unwrap an angle that suffers modulo-360 problems |
useHeading | Replace the heading for one instrument with the heading for another |
vectorShow | Show some values from a vector |
velocity | Access or modify part of an Oce object |
velocityStatistics | Report statistics of ADP or ADV velocities. |
webtide | Get a tidal prediction from a WebTide database |
wind | Wind dataset |
window.oce | Window an oce object by time or distance |
windrose-class | Class to store windrose data |
write.ctd | Write a CTD data object as a .csv file |
xyzToEnu | Change ADV or ADP coordinate systems |
xyzToEnuAdp | Convert XYZ to ENU coordinates |
xyzToEnuAdv | Convert XYZ to ENU coordinates |
+.section | Bind CTD profiles together into a cross section |
[[-method | Access or modify part of an Oce object |
[[-method | Class to store acoustic Doppler profiler data |
[[-method | Class to store acoustic Doppler velocimeter data |
[[-method | Class to store current meter data |
[[-method | Class to store coastline data |
[[-method | Class to store hydrographic data |
[[-method | Class for drifter data |
[[-method | Class to store echosounder data |
[[-method | Class to store gps data |
[[-method | Class to store landsat data |
[[-method | Class to store LISST data |
[[-method | Class to store LOBO data |
[[-method | Class to store meteorological data |
[[-method | base class of oce package |
[[-method | Class to store sealevel data |
[[-method | Class to store hydrographic section data |
[[-method | Class to store temperature-depth recorder data |
[[-method | Class to store tidal-constituent models |
[[-method | Class to store topographic data |
[[-method | Class to store windrose data |
[[<--method | Class to store acoustic Doppler profiler data |
[[<--method | Class to store acoustic Doppler velocimeter data |
[[<--method | Class to store current meter data |
[[<--method | Class to store coastline data |
[[<--method | Class to store hydrographic data |
[[<--method | Class to store echosounder data |
[[<--method | Class to store gps data |
[[<--method | Class to store landsat data |
[[<--method | Class to store LISST data |
[[<--method | Class to store LOBO data |
[[<--method | Class to store meteorological data |
[[<--method | base class of oce package |
[[<--method | Class to store sealevel data |
[[<--method | Class to store hydrographic section data |
[[<--method | Class to store temperature-depth recorder data |