Random Effects for the Identification of Differential Splicing


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Documentation for package ‘REIDS’ version 0.0.1

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REIDS-package Random Effects for the Identification of Differential Splicing.
AnnotationExampleData Annotation for the Example Data set
ASExons "ASExons"
ASREIDSRanking ASREIDSRanking
CreateOutput "CreateOutput"
DataProcessing DataProcessing
ExampleData An example data set
ExampleExonLevel Exon level data
ExampleFirmaOutput FIRMA Output
ExampleGeneLevel Gene level data
Example_DAGC DABG p-values
Example_probeset_probesfile Probe ID's for a set of probe sets
ExonTesting "ExonTesting"
FilterInformativeGenes "FilterInformativeGenes"
FIRMAScores "FIRMAScores"
iniREIDS "iniREIDS"
PivotTransformData "PivotTransformation"
PlotFunction "PlotFunction"
REIDS Random Effects for the Identification of Differential Splicing.
REIDSFunction "REIDSFunction"
REIDSFunction_ClusterVersion "REIDS_ClusterVersion"
REIDSmodel_intern "REIDSmodel_intern"
REIDS_JunctionAssessment REIDS_JunctionAssessment
Search "Search"
SpliceIndex "SpliceIndex"