landscape.mismatchdist {rmetasim}R Documentation

Calculate a mismatch distribution for a locus in a landscape

Description

Calculate mismatch distribution from a landscape based upon the number of seqregating sites.

Usage

 misdist <- landscape.mismatchdist(lnum=1,rland)

Arguments

lnum locus number to calculate mismatch upon
rland the Rmetasim landscape object

Details

Value

A matrix with num loci columns and num populations rows. Each element reflects the estimated theta for that population x locus combination

Examples

  exampleland <- landscape.new.example()
  exampleland <- landscape.simulate(exampleland, 4)
  misdist <- landscape.mismatchdist(3,exampleland) #will produce       
  misdist                                          #ridiculous output

[Package rmetasim version 1.1.008 Index]