MCMC for Spike and Slab Regression


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Documentation for package ‘BoomSpikeSlab’ version 0.5.2

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IndependentSpikeSlabPrior A spike and slab prior assuming a priori independence.
lm.spike Spike and slab regression
logit.spike Spike and slab logistic regression
mlm.spike Spike and slab multinomial logistic regression
MultinomialLogitSpikeSlabPrior Create a spike and slab prior for use with mlm.spike.
plot.lm.spike Plot the results of a spike and slab regression.
plot.logit.spike Plot a 'logit.spike' object.
PlotLogitSpikeFitSummary Fit summary for logit.spike models
PlotLogitSpikeResiduals Residual plot for 'logit.spike' objects.
PlotMarginalInclusionProbabilities Plot marginal inclusion probabilities.
PlotModelSize Plot a distribution of model size
poisson.spike Spike and slab Poisson regression
predict.lm.spike Predictions using spike-and-slab regression.
predict.logit.spike Predictions using spike-and-slab regression.
predict.poisson.spike Predictions using spike-and-slab regression.
print.summary.lm.spike Print method for spikeslab objects.
print.summary.logit.spike Print method for spikeslab objects.
spikeslab Spike and slab regression
SpikeSlabPrior Create a spike and slab prior for use with lm.spike.
SpikeSlabPriorBase Base class for spike and slab priors
SummarizeSpikeSlabCoefficients Numerical summaries of coefficients from a spike and slab regression.
summary.lm.spike Numerical summaries of the results from a spike and slab regression.
summary.logit.spike Numerical summaries of the results from a spike and slab logistic regression.