COMMUNAL-package | COmbined Mapping of Multiple clUsteriNg ALgorithms |
BRCA.100 | Breast Cancer gene expression data. |
BRCA.results | TCGA Breast Cancer subset 'clusterRange' output |
clusterKeys | Rekey cluster assignments. |
clusterRange | Run COMMUNAL over a range of data subsets |
COMMUNAL | Run clustering algorithms and evaluate validation metrics. |
COMMUNAL-class | Class '"COMMUNAL"' |
examineCounts | Examine algorithm cluster agreement |
getGoodAlgs | Choose Optimal Clustering Algorithms |
getNonCorrNonMonoMeasures | Measure cluster monotonicty within the output from clusterRange. |
measuresCorr | Measure cluster monotonicty within the output from clusterRange. |
monotoneClusterRange | Measure cluster monotonicty within the output from clusterRange. |
plotRange3D | Visualize cluster stability |
returnCore | Assign points to core clusters |
testAlgsMinSize | Choose Optimal Clustering Algorithms |