SEER and Atomic Bomb Survivor Data Analysis Tools


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Documentation for package ‘SEERaBomb’ version 2015.2

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SEERaBomb-package SEER and A-Bomb Data Analysis Tools
getFields Get fields from SEER SAS file
mapCancs Map ICD9 and ICD-O3 codes to cancers
mapRegs Map registry codes to acronyms
mapTrts Map treatment codes to factor
mk2D Make 2D-spline fits of incidences
mkAbomb Make Abomb SQLite database
mkDF Convert seerSet to data.frame for gg-plotting
mkExcel Make RR Excel file
mkSEER Make R binaries of SEER data.
mkSEERold Make SEER binaries as before
nvsr National Vital Statistic Report (nvsr) Data
nvsr01 National Vital Statistic Report (nvsr01) Data
pickFields Pick SEER fields of interest
plot2D Plot 2D cancer incidence splines
print.seerSet.summary Prints seerSet.summary objects
seerSet Join SEER cancers and PY
seerStats Summarize SEER data.
Sigurdson Chromosome translocation versus age data
simSeerSet Simulate SEER cancers and population person years
stdUS The standard population of the US in 2000
summary.seerSet Summary of seerSet object
tsd Compute RR vs tsd