Various R Functions from the Kostas Lab


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Documentation for package ‘enveomics.R’ version 1.0.1

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enveomics.R-package Various R Functions from the Kostas Lab
$-method ~~ Methods for Function '$' ~~
$-methods ~~ Methods for Function '$' ~~
enve.barplot enve barplot
enve.cliopts enve cliopts
enve.df2dist enve df2dist
enve.df2dist.group enve df2dist group
enve.df2dist.list enve df2dist list
enve.prune.dist enve prune dist
enve.recplot enve recplot
enve.RecPlot2 enve.RecPlot2 S4 class
enve.recplot2 enve recplot2
enve.RecPlot2-class enve.RecPlot2 S4 class
enve.recplot2.corePeak enve recplot2 corePeak
enve.recplot2.findPeaks enve recplot2 findPeaks
enve.RecPlot2.Peak enve.RecPlot2.Peak S4 class
enve.RecPlot2.Peak-class enve.RecPlot2.Peak S4 class
enve.recplot2.__counts enve recplot2 counts
enve.recplot2.__findPeak enve recplot2 findPeak
enve.recplot2.__findPeaks enve recplot2 findPeaks
enve.recplot2.__peakHist enve recplot2 peakHist
enve.recplot2.__whichClosestPeak enve recplot2 whichClosestPeak
enve.TRIBS enve.TRIBS S4 class
enve.tribs enve tribs
enve.TRIBS-class enve.TRIBS S4 class
enve.TRIBS.merge enve TRIBS merge
enve.tribs.test enve tribs test
enve.TRIBStest enve.TRIBStest S4 class
enve.TRIBStest-class enve.TRIBStest S4 class
enve.__prune.iter enve prune iter
enve.__prune.reduce enve prune reduce
enve.__tribs enve tribs
enveomics.R Various R Functions from the Kostas Lab
phyla.counts Counts of microbial phyla in four sites
plot.enve.RecPlot2 plot enve RecPlot2
plot.enve.TRIBS plot enve TRIBS
plot.enve.TRIBStest plot enve TRIBStest
summary.enve.TRIBS summary enve TRIBS
summary.enve.TRIBStest summary enve TRIBStest