Streamline Descriptive Analysis of Quantitative Data Matrices


[Up] [Top]

Documentation for package ‘quantable’ version 0.1

Help Pages

quantable-package Streamline descriptive analysis of quantitative data matrices
altmanbland altman-bland plot
colorscale if you need an colorscale to you imagelables use this
distmy distance among matrix columns with freely choosable distance function
getValuesForVolcano running robust scaling of arefw
imageWithLabels image plot with labels
mypairs normal pairs plot with different pch and plus abline
pairsQQ pairsplot of QQ plots
pvalCorMat pvalues for correlation matrix -
quantable Streamline descriptive analysis of quantitative data matrices
removeNArows Removes rows with more than thresh NA's from matrix
robustscale robust scaling uses median an mad instead of mean and row applies the scaling to the columns (samples) by default
runFun running function (default median absolute deviation)
runrobscale running robust scaling of arefw
runTICscale running total ion count scaling (TIC)
simpleheatmap heatmap2 facade
split2table splits names and creates a matrix
unpivot unpivot data matrix
uppertriang get values of upper triangle from matrix
volcanoplot volcano plot